Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD3DP04234 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD3DP04234 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD3DP04234 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.53■□□□□ 0.08
CD3DP04234 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.53■□□□□ 0.08
CD3DP04234 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CD3DP04234 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.53■□□□□ 0.08
CD3DP04234 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.53■□□□□ 0.08
CD3DP04234 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD3DP04234 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.53■□□□□ 0.08
CD3DP04234 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.53■□□□□ 0.08
CD3DP04234 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.53■□□□□ 0.08
CD3DP04234 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
CD3DP04234 AC092118.2-201ENST00000613495 667 ntBASIC15.53■□□□□ 0.08
CD3DP04234 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CD3DP04234 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD3DP04234 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CD3DP04234 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD3DP04234 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD3DP04234 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD3DP04234 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CD3DP04234 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD3DP04234 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD3DP04234 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD3DP04234 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CD3DP04234 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD3DP04234 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD3DP04234 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.52■□□□□ 0.08
CD3DP04234 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD3DP04234 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD3DP04234 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD3DP04234 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD3DP04234 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD3DP04234 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.52■□□□□ 0.08
CD3DP04234 LINC00602-201ENST00000629776 2065 ntBASIC15.52■□□□□ 0.08
CD3DP04234 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD3DP04234 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
CD3DP04234 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.52■□□□□ 0.08
CD3DP04234 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.52■□□□□ 0.08
CD3DP04234 Z85996.1-201ENST00000494644 937 ntBASIC15.52■□□□□ 0.08
CD3DP04234 KRT18P41-201ENST00000518924 1277 ntBASIC15.52■□□□□ 0.08
CD3DP04234 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.52■□□□□ 0.08
CD3DP04234 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.52■□□□□ 0.08
CD3DP04234 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.52■□□□□ 0.08
CD3DP04234 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD3DP04234 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD3DP04234 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.52■□□□□ 0.08
CD3DP04234 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CD3DP04234 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD3DP04234 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD3DP04234 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CD3DP04234 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CD3DP04234 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CD3DP04234 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD3DP04234 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CD3DP04234 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD3DP04234 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.52■□□□□ 0.07
CD3DP04234 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD3DP04234 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD3DP04234 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD3DP04234 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CD3DP04234 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
CD3DP04234 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
CD3DP04234 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD3DP04234 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CD3DP04234 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD3DP04234 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.51■□□□□ 0.07
CD3DP04234 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD3DP04234 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.51■□□□□ 0.07
CD3DP04234 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD3DP04234 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CD3DP04234 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD3DP04234 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.51■□□□□ 0.07
CD3DP04234 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.51■□□□□ 0.07
CD3DP04234 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD3DP04234 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD3DP04234 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD3DP04234 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.51■□□□□ 0.07
CD3DP04234 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
CD3DP04234 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.51■□□□□ 0.07
CD3DP04234 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.51■□□□□ 0.07
CD3DP04234 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD3DP04234 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CD3DP04234 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.51■□□□□ 0.07
CD3DP04234 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.51■□□□□ 0.07
CD3DP04234 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.51■□□□□ 0.07
CD3DP04234 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD3DP04234 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.51■□□□□ 0.07
CD3DP04234 SOX15-203ENST00000570788 1093 ntBASIC15.51■□□□□ 0.07
CD3DP04234 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.51■□□□□ 0.07
CD3DP04234 AC060766.5-201ENST00000590539 871 ntBASIC15.51■□□□□ 0.07
CD3DP04234 AC008687.6-201ENST00000596318 630 ntBASIC15.51■□□□□ 0.07
CD3DP04234 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD3DP04234 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD3DP04234 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD3DP04234 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD3DP04234 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD3DP04234 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD3DP04234 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CD3DP04234 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms