Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf13O54965 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf13O54965 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf13O54965 Gm6623-201ENSMUST00000173570 544 ntBASIC13.97□□□□□ -0.17
Rnf13O54965 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.97□□□□□ -0.17
Rnf13O54965 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf13O54965 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf13O54965 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf13O54965 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf13O54965 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rnf13O54965 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf13O54965 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf13O54965 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf13O54965 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rnf13O54965 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Rnf13O54965 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf13O54965 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.96□□□□□ -0.17
Rnf13O54965 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf13O54965 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf13O54965 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Rnf13O54965 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf13O54965 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf13O54965 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf13O54965 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf13O54965 Gm10013-201ENSMUST00000106074 672 ntBASIC13.96□□□□□ -0.17
Rnf13O54965 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf13O54965 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Rnf13O54965 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Rnf13O54965 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.96□□□□□ -0.17
Rnf13O54965 Gm10252-201ENSMUST00000209541 832 ntBASIC13.96□□□□□ -0.17
Rnf13O54965 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.96□□□□□ -0.17
Rnf13O54965 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.96□□□□□ -0.17
Rnf13O54965 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf13O54965 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Rnf13O54965 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf13O54965 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Rnf13O54965 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf13O54965 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.96□□□□□ -0.17
Rnf13O54965 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf13O54965 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf13O54965 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf13O54965 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf13O54965 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Rnf13O54965 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf13O54965 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.96□□□□□ -0.18
Rnf13O54965 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rnf13O54965 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf13O54965 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.95□□□□□ -0.18
Rnf13O54965 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf13O54965 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.95□□□□□ -0.18
Rnf13O54965 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.95□□□□□ -0.18
Rnf13O54965 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf13O54965 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.95□□□□□ -0.18
Rnf13O54965 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf13O54965 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rnf13O54965 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf13O54965 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.95□□□□□ -0.18
Rnf13O54965 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.95□□□□□ -0.18
Rnf13O54965 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf13O54965 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.95□□□□□ -0.18
Rnf13O54965 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf13O54965 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.95□□□□□ -0.18
Rnf13O54965 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf13O54965 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf13O54965 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf13O54965 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf13O54965 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf13O54965 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf13O54965 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf13O54965 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf13O54965 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.95□□□□□ -0.18
Rnf13O54965 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf13O54965 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Rnf13O54965 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rnf13O54965 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.94□□□□□ -0.18
Rnf13O54965 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Gm9013-201ENSMUST00000132939 882 ntBASIC13.94□□□□□ -0.18
Rnf13O54965 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.94□□□□□ -0.18
Rnf13O54965 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.94□□□□□ -0.18
Rnf13O54965 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Rnf13O54965 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Rnf13O54965 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rnf13O54965 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf13O54965 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.94□□□□□ -0.18
Rnf13O54965 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Rnf13O54965 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms