Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Gm6257-201ENSMUST00000163864 910 ntBASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav7n-4A0A075B620 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Gm11539-201ENSMUST00000119837 557 ntBASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav7n-4A0A075B620 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms