Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CDK11AQ9UQ88 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CDK11AQ9UQ88 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CDK11AQ9UQ88 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CDK11AQ9UQ88 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CDK11AQ9UQ88 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC28.23■■■□□ 2.11
CDK11AQ9UQ88 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
CDK11AQ9UQ88 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC28.23■■■□□ 2.11
CDK11AQ9UQ88 AC116407.3-201ENST00000623905 1129 ntBASIC28.23■■■□□ 2.11
CDK11AQ9UQ88 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
CDK11AQ9UQ88 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CDK11AQ9UQ88 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC28.23■■■□□ 2.11
CDK11AQ9UQ88 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC28.23■■■□□ 2.11
CDK11AQ9UQ88 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CDK11AQ9UQ88 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC28.23■■■□□ 2.11
CDK11AQ9UQ88 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
CDK11AQ9UQ88 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CDK11AQ9UQ88 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC28.22■■■□□ 2.11
CDK11AQ9UQ88 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CDK11AQ9UQ88 AC007952.6-201ENST00000573168 2673 ntBASIC28.22■■■□□ 2.11
CDK11AQ9UQ88 AC003957.1-201ENST00000625108 2673 ntBASIC28.22■■■□□ 2.11
CDK11AQ9UQ88 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC28.22■■■□□ 2.11
CDK11AQ9UQ88 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CDK11AQ9UQ88 SNCG-201ENST00000348795 684 ntTSL 2 BASIC28.22■■■□□ 2.11
CDK11AQ9UQ88 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
CDK11AQ9UQ88 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC28.22■■■□□ 2.11
CDK11AQ9UQ88 TERC-201ENST00000602385 541 ntBASIC28.22■■■□□ 2.11
CDK11AQ9UQ88 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
CDK11AQ9UQ88 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC28.21■■■□□ 2.11
CDK11AQ9UQ88 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC28.21■■■□□ 2.11
CDK11AQ9UQ88 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CDK11AQ9UQ88 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
CDK11AQ9UQ88 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CDK11AQ9UQ88 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC28.21■■■□□ 2.11
CDK11AQ9UQ88 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC28.21■■■□□ 2.11
CDK11AQ9UQ88 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CDK11AQ9UQ88 KRT18P65-201ENST00000439811 1286 ntBASIC28.21■■■□□ 2.11
CDK11AQ9UQ88 ABCD1P5-201ENST00000445663 754 ntBASIC28.21■■■□□ 2.11
CDK11AQ9UQ88 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
CDK11AQ9UQ88 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
CDK11AQ9UQ88 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC28.21■■■□□ 2.11
CDK11AQ9UQ88 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CDK11AQ9UQ88 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
CDK11AQ9UQ88 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CDK11AQ9UQ88 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CDK11AQ9UQ88 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
CDK11AQ9UQ88 FABP5-202ENST00000396359 986 ntTSL 5 BASIC28.2■■■□□ 2.1
CDK11AQ9UQ88 COX10-202ENST00000429152 875 ntTSL 2 BASIC28.2■■■□□ 2.1
CDK11AQ9UQ88 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC28.2■■■□□ 2.1
CDK11AQ9UQ88 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC28.2■■■□□ 2.1
CDK11AQ9UQ88 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
CDK11AQ9UQ88 AC092865.5-201ENST00000545435 363 ntBASIC28.2■■■□□ 2.1
CDK11AQ9UQ88 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC28.2■■■□□ 2.1
CDK11AQ9UQ88 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC28.2■■■□□ 2.1
CDK11AQ9UQ88 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CDK11AQ9UQ88 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
CDK11AQ9UQ88 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CDK11AQ9UQ88 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CDK11AQ9UQ88 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC28.2■■■□□ 2.1
CDK11AQ9UQ88 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC28.19■■■□□ 2.1
CDK11AQ9UQ88 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
CDK11AQ9UQ88 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC28.19■■■□□ 2.1
CDK11AQ9UQ88 LINC00602-201ENST00000629776 2065 ntBASIC28.19■■■□□ 2.1
CDK11AQ9UQ88 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC28.19■■■□□ 2.1
CDK11AQ9UQ88 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC28.19■■■□□ 2.1
CDK11AQ9UQ88 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC28.19■■■□□ 2.1
CDK11AQ9UQ88 AC021087.4-201ENST00000563761 564 ntBASIC28.19■■■□□ 2.1
CDK11AQ9UQ88 AC145285.3-201ENST00000564603 959 ntBASIC28.19■■■□□ 2.1
CDK11AQ9UQ88 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC28.19■■■□□ 2.1
CDK11AQ9UQ88 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CDK11AQ9UQ88 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC28.19■■■□□ 2.1
CDK11AQ9UQ88 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
CDK11AQ9UQ88 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC28.19■■■□□ 2.1
CDK11AQ9UQ88 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC28.19■■■□□ 2.1
CDK11AQ9UQ88 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
CDK11AQ9UQ88 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC28.18■■■□□ 2.1
CDK11AQ9UQ88 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
CDK11AQ9UQ88 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CDK11AQ9UQ88 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CDK11AQ9UQ88 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CDK11AQ9UQ88 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
CDK11AQ9UQ88 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC28.18■■■□□ 2.1
CDK11AQ9UQ88 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CDK11AQ9UQ88 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC28.18■■■□□ 2.1
CDK11AQ9UQ88 FUOM-202ENST00000368551 628 ntTSL 3 BASIC28.18■■■□□ 2.1
CDK11AQ9UQ88 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CDK11AQ9UQ88 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
CDK11AQ9UQ88 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC28.18■■■□□ 2.1
CDK11AQ9UQ88 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC28.18■■■□□ 2.1
CDK11AQ9UQ88 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
CDK11AQ9UQ88 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
CDK11AQ9UQ88 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
CDK11AQ9UQ88 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
CDK11AQ9UQ88 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC28.18■■■□□ 2.1
CDK11AQ9UQ88 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
CDK11AQ9UQ88 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
CDK11AQ9UQ88 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
CDK11AQ9UQ88 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CDK11AQ9UQ88 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC28.17■■■□□ 2.1
CDK11AQ9UQ88 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms