Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.85□□□□□ -0.03
Ube4bQ9ES00 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ube4bQ9ES00 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ube4bQ9ES00 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ube4bQ9ES00 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Ube4bQ9ES00 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ube4bQ9ES00 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ube4bQ9ES00 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ube4bQ9ES00 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ube4bQ9ES00 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ube4bQ9ES00 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 Gm3375-201ENSMUST00000203929 796 ntBASIC14.83□□□□□ -0.04
Ube4bQ9ES00 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube4bQ9ES00 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Gm21814-202ENSMUST00000203277 873 ntBASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms