Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.79■□□□□ 0.12
Pcdhb11Q91UZ8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb11Q91UZ8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb11Q91UZ8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb11Q91UZ8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb11Q91UZ8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb11Q91UZ8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb11Q91UZ8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb11Q91UZ8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb11Q91UZ8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Gm6550-201ENSMUST00000187574 993 ntBASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb11Q91UZ8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb11Q91UZ8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb11Q91UZ8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb11Q91UZ8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb11Q91UZ8 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb11Q91UZ8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb11Q91UZ8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.77■□□□□ 0.12
Pcdhb11Q91UZ8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb11Q91UZ8 Gm7461-201ENSMUST00000058918 827 ntBASIC15.77■□□□□ 0.12
Pcdhb11Q91UZ8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Pcdhb11Q91UZ8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb11Q91UZ8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Pcdhb11Q91UZ8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.77■□□□□ 0.11
Pcdhb11Q91UZ8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb11Q91UZ8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb11Q91UZ8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb11Q91UZ8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb11Q91UZ8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb11Q91UZ8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb11Q91UZ8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb11Q91UZ8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb11Q91UZ8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb11Q91UZ8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb11Q91UZ8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb11Q91UZ8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pcdhb11Q91UZ8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb11Q91UZ8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb11Q91UZ8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb11Q91UZ8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhb11Q91UZ8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb11Q91UZ8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.75■□□□□ 0.11
Pcdhb11Q91UZ8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb11Q91UZ8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdhb11Q91UZ8 Gm18195-201ENSMUST00000207604 706 ntBASIC15.75■□□□□ 0.11
Pcdhb11Q91UZ8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.75■□□□□ 0.11
Pcdhb11Q91UZ8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms