Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 AC117500.6-201ENST00000624871 588 ntBASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.93■□□□□ 0.62
NPAS3Q8IXF0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.92■□□□□ 0.62
NPAS3Q8IXF0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS3Q8IXF0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS3Q8IXF0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS3Q8IXF0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS3Q8IXF0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS3Q8IXF0 TP73-AS1-210ENST00000637775 1455 ntBASIC18.92■□□□□ 0.62
NPAS3Q8IXF0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.92■□□□□ 0.62
NPAS3Q8IXF0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.92■□□□□ 0.62
NPAS3Q8IXF0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS3Q8IXF0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
NPAS3Q8IXF0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.92■□□□□ 0.62
NPAS3Q8IXF0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NPAS3Q8IXF0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS3Q8IXF0 AL161938.1-201ENST00000569833 2180 ntBASIC18.92■□□□□ 0.62
NPAS3Q8IXF0 AC243591.1-201ENST00000452967 1364 ntBASIC18.92■□□□□ 0.62
NPAS3Q8IXF0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NPAS3Q8IXF0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS3Q8IXF0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS3Q8IXF0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 AC068472.1-201ENST00000474589 881 ntBASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 MIR7706-201ENST00000613747 67 ntBASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 AL355877.3-201ENST00000622820 899 ntBASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 AC112777.1-201ENST00000540175 1423 ntBASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NPAS3Q8IXF0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 SDHAP2-201ENST00000455183 2001 ntBASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 FGFR3P6-201ENST00000457012 610 ntBASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 AC093909.1-201ENST00000504731 1122 ntBASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 AL024508.2-201ENST00000607749 1894 ntBASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS3Q8IXF0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
NPAS3Q8IXF0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NPAS3Q8IXF0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
NPAS3Q8IXF0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.89■□□□□ 0.62
NPAS3Q8IXF0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
NPAS3Q8IXF0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NPAS3Q8IXF0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NPAS3Q8IXF0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms