Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hist3h2bbQ8CGP0 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Hist3h2bbQ8CGP0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Hist3h2bbQ8CGP0 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.71□□□□□ -0.53
Hist3h2bbQ8CGP0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hist3h2bbQ8CGP0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hist3h2bbQ8CGP0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Hist3h2bbQ8CGP0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hist3h2bbQ8CGP0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Hist3h2bbQ8CGP0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hist3h2bbQ8CGP0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.71□□□□□ -0.53
Hist3h2bbQ8CGP0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hist3h2bbQ8CGP0 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.71□□□□□ -0.53
Hist3h2bbQ8CGP0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hist3h2bbQ8CGP0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hist3h2bbQ8CGP0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Hist3h2bbQ8CGP0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hist3h2bbQ8CGP0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC11.71□□□□□ -0.53
Hist3h2bbQ8CGP0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC11.71□□□□□ -0.53
Hist3h2bbQ8CGP0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC11.71□□□□□ -0.53
Hist3h2bbQ8CGP0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hist3h2bbQ8CGP0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hist3h2bbQ8CGP0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hist3h2bbQ8CGP0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hist3h2bbQ8CGP0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11.71□□□□□ -0.54
Hist3h2bbQ8CGP0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hist3h2bbQ8CGP0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.71□□□□□ -0.54
Hist3h2bbQ8CGP0 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hist3h2bbQ8CGP0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hist3h2bbQ8CGP0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hist3h2bbQ8CGP0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.54
Hist3h2bbQ8CGP0 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hist3h2bbQ8CGP0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.71□□□□□ -0.54
Hist3h2bbQ8CGP0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hist3h2bbQ8CGP0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.71□□□□□ -0.54
Hist3h2bbQ8CGP0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hist3h2bbQ8CGP0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hist3h2bbQ8CGP0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Gm12008-201ENSMUST00000117791 755 ntBASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Gm5921-201ENSMUST00000075898 882 ntBASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hist3h2bbQ8CGP0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms