Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf7Q8BTV2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Cpsf7Q8BTV2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Cpsf7Q8BTV2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Gm27389-201ENSMUST00000183622 195 ntBASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Gm21362-201ENSMUST00000194272 928 ntBASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpsf7Q8BTV2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Cpsf7Q8BTV2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpsf7Q8BTV2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cpsf7Q8BTV2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cpsf7Q8BTV2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cpsf7Q8BTV2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Cpsf7Q8BTV2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpsf7Q8BTV2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cpsf7Q8BTV2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpsf7Q8BTV2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpsf7Q8BTV2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpsf7Q8BTV2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cpsf7Q8BTV2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpsf7Q8BTV2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpsf7Q8BTV2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpsf7Q8BTV2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpsf7Q8BTV2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpsf7Q8BTV2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Cpsf7Q8BTV2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpsf7Q8BTV2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpsf7Q8BTV2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cpsf7Q8BTV2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cpsf7Q8BTV2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Cpsf7Q8BTV2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cpsf7Q8BTV2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cpsf7Q8BTV2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cpsf7Q8BTV2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Cpsf7Q8BTV2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cpsf7Q8BTV2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Cpsf7Q8BTV2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cpsf7Q8BTV2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cpsf7Q8BTV2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cpsf7Q8BTV2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.43■□□□□ 0.06
Cpsf7Q8BTV2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms