Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cks1brtQ3UNC9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.15□□□□□ -0.63
Cks1brtQ3UNC9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cks1brtQ3UNC9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cks1brtQ3UNC9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cks1brtQ3UNC9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Cks1brtQ3UNC9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cks1brtQ3UNC9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cks1brtQ3UNC9 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.15□□□□□ -0.63
Cks1brtQ3UNC9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Cks1brtQ3UNC9 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Gm18958-201ENSMUST00000174258 762 ntBASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cks1brtQ3UNC9 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cks1brtQ3UNC9 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cks1brtQ3UNC9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms