Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC092910.1-201ENST00000482027 1129 ntBASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 AL138831.2-201ENST00000606564 490 ntBASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 AC027601.4-201ENST00000611259 610 ntBASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC24.21■■□□□ 1.47
CSB-PGBD3P0DP91 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC24.2■■□□□ 1.47
CSB-PGBD3P0DP91 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.47
CSB-PGBD3P0DP91 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC24.2■■□□□ 1.47
CSB-PGBD3P0DP91 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC24.2■■□□□ 1.46
CSB-PGBD3P0DP91 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC24.2■■□□□ 1.46
CSB-PGBD3P0DP91 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC24.2■■□□□ 1.46
CSB-PGBD3P0DP91 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CSB-PGBD3P0DP91 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC24.2■■□□□ 1.46
CSB-PGBD3P0DP91 PGAM5P1-201ENST00000518923 814 ntBASIC24.2■■□□□ 1.46
CSB-PGBD3P0DP91 IGHV3-22-201ENST00000520721 359 ntBASIC24.2■■□□□ 1.46
CSB-PGBD3P0DP91 AL356488.2-201ENST00000602755 427 ntBASIC24.2■■□□□ 1.46
CSB-PGBD3P0DP91 AC009154.2-201ENST00000621177 724 ntBASIC24.2■■□□□ 1.46
CSB-PGBD3P0DP91 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CSB-PGBD3P0DP91 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
CSB-PGBD3P0DP91 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CSB-PGBD3P0DP91 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 MED15P5-201ENST00000423150 992 ntBASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 RBSN-204ENST00000449050 903 ntTSL 2 BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 AC145285.3-201ENST00000564603 959 ntBASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 AC011467.2-201ENST00000598425 242 ntBASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 AC140113.2-201ENST00000604370 208 ntBASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 HLA-J-201ENST00000462773 1622 ntBASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 AL024508.2-201ENST00000607749 1894 ntBASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CSB-PGBD3P0DP91 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
CSB-PGBD3P0DP91 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CSB-PGBD3P0DP91 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
CSB-PGBD3P0DP91 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
CSB-PGBD3P0DP91 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
CSB-PGBD3P0DP91 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CSB-PGBD3P0DP91 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CSB-PGBD3P0DP91 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CSB-PGBD3P0DP91 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC24.18■■□□□ 1.46
CSB-PGBD3P0DP91 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CSB-PGBD3P0DP91 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC24.18■■□□□ 1.46
CSB-PGBD3P0DP91 ABCD1P5-201ENST00000445663 754 ntBASIC24.18■■□□□ 1.46
CSB-PGBD3P0DP91 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC24.18■■□□□ 1.46
CSB-PGBD3P0DP91 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC24.18■■□□□ 1.46
CSB-PGBD3P0DP91 AC007952.6-201ENST00000573168 2673 ntBASIC24.18■■□□□ 1.46
CSB-PGBD3P0DP91 AC003957.1-201ENST00000625108 2673 ntBASIC24.18■■□□□ 1.46
CSB-PGBD3P0DP91 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
CSB-PGBD3P0DP91 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CSB-PGBD3P0DP91 LINC00602-201ENST00000629776 2065 ntBASIC24.18■■□□□ 1.46
CSB-PGBD3P0DP91 SDHAP2-201ENST00000455183 2001 ntBASIC24.18■■□□□ 1.46
CSB-PGBD3P0DP91 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
CSB-PGBD3P0DP91 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CSB-PGBD3P0DP91 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 AC098831.1-202ENST00000438821 336 ntBASIC24.17■■□□□ 1.46
CSB-PGBD3P0DP91 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms