Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf11O35235 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.06□□□□□ -0.48
Tnfsf11O35235 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf11O35235 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf11O35235 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf11O35235 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tnfsf11O35235 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Tnfsf11O35235 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf11O35235 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf11O35235 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf11O35235 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.06□□□□□ -0.48
Tnfsf11O35235 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.06□□□□□ -0.48
Tnfsf11O35235 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.06□□□□□ -0.48
Tnfsf11O35235 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf11O35235 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf11O35235 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf11O35235 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf11O35235 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf11O35235 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf11O35235 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf11O35235 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf11O35235 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf11O35235 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Tnfsf11O35235 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf11O35235 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfsf11O35235 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.05□□□□□ -0.48
Tnfsf11O35235 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Gm7370-201ENSMUST00000219471 767 ntBASIC12.05□□□□□ -0.48
Tnfsf11O35235 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Tnfsf11O35235 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.04□□□□□ -0.48
Tnfsf11O35235 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf11O35235 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.03□□□□□ -0.48
Tnfsf11O35235 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms