Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syce3B5KM66 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Syce3B5KM66 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Syce3B5KM66 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syce3B5KM66 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syce3B5KM66 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syce3B5KM66 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.69■□□□□ 0.42
Syce3B5KM66 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Syce3B5KM66 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syce3B5KM66 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syce3B5KM66 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syce3B5KM66 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Syce3B5KM66 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.68■□□□□ 0.42
Syce3B5KM66 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Syce3B5KM66 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syce3B5KM66 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syce3B5KM66 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Syce3B5KM66 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.68■□□□□ 0.42
Syce3B5KM66 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.68■□□□□ 0.42
Syce3B5KM66 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Syce3B5KM66 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Syce3B5KM66 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Syce3B5KM66 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.68■□□□□ 0.42
Syce3B5KM66 Gm20760-201ENSMUST00000179197 648 ntBASIC17.68■□□□□ 0.42
Syce3B5KM66 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syce3B5KM66 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syce3B5KM66 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syce3B5KM66 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syce3B5KM66 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syce3B5KM66 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syce3B5KM66 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syce3B5KM66 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Syce3B5KM66 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syce3B5KM66 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Syce3B5KM66 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syce3B5KM66 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syce3B5KM66 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Syce3B5KM66 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.67■□□□□ 0.42
Syce3B5KM66 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syce3B5KM66 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syce3B5KM66 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syce3B5KM66 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.67■□□□□ 0.42
Syce3B5KM66 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.67■□□□□ 0.42
Syce3B5KM66 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syce3B5KM66 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syce3B5KM66 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
Syce3B5KM66 Mir1668-201ENSMUST00000184114 107 ntBASIC17.67■□□□□ 0.42
Syce3B5KM66 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.67■□□□□ 0.42
Syce3B5KM66 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syce3B5KM66 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syce3B5KM66 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Syce3B5KM66 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syce3B5KM66 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syce3B5KM66 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.67■□□□□ 0.42
Syce3B5KM66 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syce3B5KM66 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syce3B5KM66 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syce3B5KM66 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Syce3B5KM66 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syce3B5KM66 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.66■□□□□ 0.42
Syce3B5KM66 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syce3B5KM66 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Syce3B5KM66 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Syce3B5KM66 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Syce3B5KM66 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syce3B5KM66 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syce3B5KM66 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syce3B5KM66 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syce3B5KM66 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
Syce3B5KM66 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syce3B5KM66 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syce3B5KM66 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syce3B5KM66 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Syce3B5KM66 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syce3B5KM66 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.66■□□□□ 0.42
Syce3B5KM66 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syce3B5KM66 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Syce3B5KM66 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syce3B5KM66 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Syce3B5KM66 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syce3B5KM66 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syce3B5KM66 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syce3B5KM66 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Syce3B5KM66 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syce3B5KM66 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syce3B5KM66 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Syce3B5KM66 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Syce3B5KM66 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.65■□□□□ 0.42
Syce3B5KM66 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.65■□□□□ 0.42
Syce3B5KM66 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syce3B5KM66 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Syce3B5KM66 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Syce3B5KM66 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syce3B5KM66 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
Syce3B5KM66 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syce3B5KM66 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syce3B5KM66 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syce3B5KM66 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syce3B5KM66 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syce3B5KM66 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms