Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MBD3L5A6NJ08 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MBD3L5A6NJ08 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 AC096582.2-201ENST00000510860 516 ntBASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MBD3L5A6NJ08 GMCL1P1-201ENST00000463439 1581 ntBASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 AC009078.2-202ENST00000463353 338 ntBASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 MIR5100-201ENST00000579544 119 ntBASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 AL591684.3-201ENST00000605187 298 ntBASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MBD3L5A6NJ08 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 AC106795.1-205ENST00000512851 1056 ntBASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 AP002469.2-201ENST00000531724 424 ntBASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 AC009533.2-201ENST00000543664 586 ntBASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
MBD3L5A6NJ08 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MBD3L5A6NJ08 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MBD3L5A6NJ08 AC005082.1-201ENST00000413042 2259 ntBASIC16.02■□□□□ 0.16
MBD3L5A6NJ08 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MBD3L5A6NJ08 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MBD3L5A6NJ08 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MBD3L5A6NJ08 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MBD3L5A6NJ08 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms