Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmg20aQ9DC33 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmg20aQ9DC33 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.17□□□□□ -0.14
Hmg20aQ9DC33 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hmg20aQ9DC33 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmg20aQ9DC33 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmg20aQ9DC33 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmg20aQ9DC33 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmg20aQ9DC33 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmg20aQ9DC33 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.15□□□□□ -0.14
Hmg20aQ9DC33 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Hmg20aQ9DC33 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Gm10698-201ENSMUST00000182663 604 ntBASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Gm37025-201ENSMUST00000195159 829 ntBASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmg20aQ9DC33 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmg20aQ9DC33 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Hmg20aQ9DC33 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmg20aQ9DC33 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmg20aQ9DC33 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms