Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd1Q9D0E3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
Lysmd1Q9D0E3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Lysmd1Q9D0E3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lysmd1Q9D0E3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lysmd1Q9D0E3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Lysmd1Q9D0E3 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.39■□□□□ 0.21
Lysmd1Q9D0E3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lysmd1Q9D0E3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lysmd1Q9D0E3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Lysmd1Q9D0E3 Mir1894-201ENSMUST00000122802 81 ntBASIC16.39■□□□□ 0.21
Lysmd1Q9D0E3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.39■□□□□ 0.21
Lysmd1Q9D0E3 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC16.39■□□□□ 0.21
Lysmd1Q9D0E3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.39■□□□□ 0.21
Lysmd1Q9D0E3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC16.39■□□□□ 0.21
Lysmd1Q9D0E3 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC16.39■□□□□ 0.21
Lysmd1Q9D0E3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lysmd1Q9D0E3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Lysmd1Q9D0E3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC16.39■□□□□ 0.21
Lysmd1Q9D0E3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lysmd1Q9D0E3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Lysmd1Q9D0E3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lysmd1Q9D0E3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lysmd1Q9D0E3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lysmd1Q9D0E3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lysmd1Q9D0E3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.38■□□□□ 0.21
Lysmd1Q9D0E3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lysmd1Q9D0E3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lysmd1Q9D0E3 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
Lysmd1Q9D0E3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC16.38■□□□□ 0.21
Lysmd1Q9D0E3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC16.38■□□□□ 0.21
Lysmd1Q9D0E3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.38■□□□□ 0.21
Lysmd1Q9D0E3 Gm8801-201ENSMUST00000173255 1064 ntBASIC16.38■□□□□ 0.21
Lysmd1Q9D0E3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Lysmd1Q9D0E3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lysmd1Q9D0E3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lysmd1Q9D0E3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lysmd1Q9D0E3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lysmd1Q9D0E3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.38■□□□□ 0.21
Lysmd1Q9D0E3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lysmd1Q9D0E3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 AA619741-201ENSMUST00000195095 646 ntBASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lysmd1Q9D0E3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd1Q9D0E3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.36■□□□□ 0.21
Lysmd1Q9D0E3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd1Q9D0E3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd1Q9D0E3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Lysmd1Q9D0E3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd1Q9D0E3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd1Q9D0E3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd1Q9D0E3 Gm13461-201ENSMUST00000120980 662 ntBASIC16.36■□□□□ 0.21
Lysmd1Q9D0E3 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC16.36■□□□□ 0.21
Lysmd1Q9D0E3 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd1Q9D0E3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Lysmd1Q9D0E3 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC16.36■□□□□ 0.21
Lysmd1Q9D0E3 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Lysmd1Q9D0E3 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.36■□□□□ 0.21
Lysmd1Q9D0E3 AC093022.1-201ENSMUST00000226949 1072 ntBASIC16.36■□□□□ 0.21
Lysmd1Q9D0E3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd1Q9D0E3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd1Q9D0E3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd1Q9D0E3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd1Q9D0E3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lysmd1Q9D0E3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lysmd1Q9D0E3 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms