Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb4Q91XZ6 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Mir3081-201ENSMUST00000175305 84 ntBASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb4Q91XZ6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Rprl3-201ENSMUST00000157400 290 ntBASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Gm27704-201ENSMUST00000185094 107 ntBASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhb4Q91XZ6 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.35■□□□□ 0.05
Pcdhb4Q91XZ6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms