Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdh18Q8VHR0 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh18Q8VHR0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Gm6433-201ENSMUST00000118634 875 ntBASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Gm36967-201ENSMUST00000193814 266 ntBASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Pcdh18Q8VHR0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms