Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 Gm25990-201ENSMUST00000102440 86 ntBASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 Gm27525-201ENSMUST00000184465 107 ntBASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rab11fip4Q8BQP8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Gm12350-201ENSMUST00000121208 462 ntBASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Gm15173-201ENSMUST00000122049 433 ntBASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rab11fip4Q8BQP8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Gm7230-201ENSMUST00000173026 815 ntBASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Gm9172-201ENSMUST00000212092 954 ntBASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip4Q8BQP8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip4Q8BQP8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.1■□□□□ 0.33
Rab11fip4Q8BQP8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rab11fip4Q8BQP8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip4Q8BQP8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip4Q8BQP8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip4Q8BQP8 Gm4459-201ENSMUST00000118750 468 ntBASIC17.1■□□□□ 0.33
Rab11fip4Q8BQP8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip4Q8BQP8 Gm25406-201ENSMUST00000157599 105 ntBASIC17.1■□□□□ 0.33
Rab11fip4Q8BQP8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip4Q8BQP8 Mir5126-201ENSMUST00000175513 77 ntBASIC17.1■□□□□ 0.33
Rab11fip4Q8BQP8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.1■□□□□ 0.33
Rab11fip4Q8BQP8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip4Q8BQP8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rab11fip4Q8BQP8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip4Q8BQP8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip4Q8BQP8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip4Q8BQP8 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip4Q8BQP8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip4Q8BQP8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Rab11fip4Q8BQP8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip4Q8BQP8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip4Q8BQP8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms