Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Gm9727-201ENSMUST00000161387 555 ntBASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Gm5264-201ENSMUST00000190584 848 ntBASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Trav2Q5R1I9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trav2Q5R1I9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav2Q5R1I9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav2Q5R1I9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Gm37935-201ENSMUST00000192012 982 ntBASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.33□□□□□ -0.44
Trav2Q5R1I9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.33□□□□□ -0.44
Trav2Q5R1I9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.33□□□□□ -0.44
Trav2Q5R1I9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav2Q5R1I9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms