Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 LINC01711-201ENST00000598340 967 ntBASIC21.36■■□□□ 1.01
SHROOM1Q2M3G4 AC148477.8-201ENST00000624298 468 ntBASIC21.36■■□□□ 1.01
SHROOM1Q2M3G4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SHROOM1Q2M3G4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SHROOM1Q2M3G4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.36■■□□□ 1.01
SHROOM1Q2M3G4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SHROOM1Q2M3G4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SHROOM1Q2M3G4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
SHROOM1Q2M3G4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.36■■□□□ 1.01
SHROOM1Q2M3G4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 ANO7L1-203ENST00000602586 1720 ntBASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 RCN1P2-201ENST00000398357 915 ntBASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 AL022342.1-201ENST00000400363 863 ntBASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 VENTXP7-201ENST00000475503 772 ntBASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 AC113404.2-201ENST00000507884 177 ntBASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 MIR5100-201ENST00000579544 119 ntBASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SHROOM1Q2M3G4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.34■■□□□ 1.01
SHROOM1Q2M3G4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SHROOM1Q2M3G4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.34■■□□□ 1.01
SHROOM1Q2M3G4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SHROOM1Q2M3G4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SHROOM1Q2M3G4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
SHROOM1Q2M3G4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.34■■□□□ 1.01
SHROOM1Q2M3G4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.34■■□□□ 1.01
SHROOM1Q2M3G4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SHROOM1Q2M3G4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.34■■□□□ 1.01
SHROOM1Q2M3G4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SHROOM1Q2M3G4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SHROOM1Q2M3G4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SHROOM1Q2M3G4 AC112777.1-201ENST00000540175 1423 ntBASIC21.34■■□□□ 1.01
SHROOM1Q2M3G4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SHROOM1Q2M3G4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SHROOM1Q2M3G4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SHROOM1Q2M3G4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.34■■□□□ 1.01
SHROOM1Q2M3G4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.33■■□□□ 1.01
SHROOM1Q2M3G4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.33■■□□□ 1.01
SHROOM1Q2M3G4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SHROOM1Q2M3G4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SHROOM1Q2M3G4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.33■■□□□ 1.01
SHROOM1Q2M3G4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SHROOM1Q2M3G4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SHROOM1Q2M3G4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SHROOM1Q2M3G4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.33■■□□□ 1.01
SHROOM1Q2M3G4 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.33■■□□□ 1.01
SHROOM1Q2M3G4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.33■■□□□ 1.01
SHROOM1Q2M3G4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.33■■□□□ 1.01
SHROOM1Q2M3G4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.33■■□□□ 1.01
SHROOM1Q2M3G4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.33■■□□□ 1.01
SHROOM1Q2M3G4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.33■■□□□ 1.01
SHROOM1Q2M3G4 AL671883.3-201ENST00000603274 991 ntBASIC21.33■■□□□ 1.01
SHROOM1Q2M3G4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SHROOM1Q2M3G4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SHROOM1Q2M3G4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SHROOM1Q2M3G4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
SHROOM1Q2M3G4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.33■■□□□ 1
SHROOM1Q2M3G4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
SHROOM1Q2M3G4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SHROOM1Q2M3G4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SHROOM1Q2M3G4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms