Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 AC011298.2-201ENST00000617989 482 ntBASIC14.07□□□□□ -0.16
HIST1H1AQ02539 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 RCC2P6-201ENST00000526625 1557 ntBASIC14.07□□□□□ -0.16
HIST1H1AQ02539 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H1AQ02539 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 KRT18P29-201ENST00000397031 1267 ntBASIC14.06□□□□□ -0.16
HIST1H1AQ02539 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.06□□□□□ -0.16
HIST1H1AQ02539 AC091390.4-202ENST00000476426 537 ntBASIC14.06□□□□□ -0.16
HIST1H1AQ02539 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 AL031985.4-201ENST00000642138 673 ntBASIC14.06□□□□□ -0.16
HIST1H1AQ02539 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 HEIH-201ENST00000623091 1652 ntBASIC14.06□□□□□ -0.16
HIST1H1AQ02539 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HIST1H1AQ02539 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 PKD1P5-201ENST00000532415 10291 ntBASIC14.05□□□□□ -0.16
HIST1H1AQ02539 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 AC073195.1-201ENST00000607241 877 ntBASIC14.05□□□□□ -0.16
HIST1H1AQ02539 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST1H1AQ02539 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.05□□□□□ -0.16
HIST1H1AQ02539 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms