Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.24■□□□□ 0.83
CDK7P50613 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.24■□□□□ 0.83
CDK7P50613 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK7P50613 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK7P50613 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK7P50613 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDK7P50613 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDK7P50613 MIR940-201ENST00000401276 94 ntBASIC20.24■□□□□ 0.83
CDK7P50613 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDK7P50613 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.24■□□□□ 0.83
CDK7P50613 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.24■□□□□ 0.83
CDK7P50613 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.24■□□□□ 0.83
CDK7P50613 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.24■□□□□ 0.83
CDK7P50613 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.24■□□□□ 0.83
CDK7P50613 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.24■□□□□ 0.83
CDK7P50613 MTDHP3-201ENST00000594186 672 ntBASIC20.24■□□□□ 0.83
CDK7P50613 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.24■□□□□ 0.83
CDK7P50613 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.24■□□□□ 0.83
CDK7P50613 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDK7P50613 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK7P50613 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK7P50613 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CDK7P50613 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK7P50613 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.23■□□□□ 0.83
CDK7P50613 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK7P50613 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK7P50613 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK7P50613 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK7P50613 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK7P50613 AC141586.3-201ENST00000562166 1838 ntBASIC20.23■□□□□ 0.83
CDK7P50613 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK7P50613 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK7P50613 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.23■□□□□ 0.83
CDK7P50613 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDK7P50613 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CDK7P50613 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK7P50613 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDK7P50613 FAM220CP-201ENST00000395253 831 ntBASIC20.23■□□□□ 0.83
CDK7P50613 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.23■□□□□ 0.83
CDK7P50613 PGAM5P1-201ENST00000518923 814 ntBASIC20.23■□□□□ 0.83
CDK7P50613 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CDK7P50613 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.23■□□□□ 0.83
CDK7P50613 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.23■□□□□ 0.83
CDK7P50613 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.23■□□□□ 0.83
CDK7P50613 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.23■□□□□ 0.83
CDK7P50613 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDK7P50613 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK7P50613 AC125437.2-201ENST00000625180 2167 ntBASIC20.23■□□□□ 0.83
CDK7P50613 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK7P50613 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK7P50613 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.23■□□□□ 0.83
CDK7P50613 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.23■□□□□ 0.83
CDK7P50613 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDK7P50613 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.23■□□□□ 0.83
CDK7P50613 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
CDK7P50613 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.22■□□□□ 0.83
CDK7P50613 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK7P50613 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK7P50613 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.22■□□□□ 0.83
CDK7P50613 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
CDK7P50613 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.22■□□□□ 0.83
CDK7P50613 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK7P50613 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK7P50613 AC005104.2-201ENST00000427818 678 ntBASIC20.22■□□□□ 0.83
CDK7P50613 AC068472.1-201ENST00000474589 881 ntBASIC20.22■□□□□ 0.83
CDK7P50613 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.22■□□□□ 0.83
CDK7P50613 AC145285.3-201ENST00000564603 959 ntBASIC20.22■□□□□ 0.83
CDK7P50613 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK7P50613 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.22■□□□□ 0.83
CDK7P50613 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK7P50613 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.22■□□□□ 0.83
CDK7P50613 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDK7P50613 AP001269.4-201ENST00000609611 512 ntBASIC20.22■□□□□ 0.83
CDK7P50613 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK7P50613 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.22■□□□□ 0.83
CDK7P50613 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDK7P50613 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.22■□□□□ 0.83
CDK7P50613 AC087289.5-201ENST00000586076 3175 ntBASIC20.22■□□□□ 0.83
CDK7P50613 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK7P50613 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK7P50613 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.22■□□□□ 0.83
CDK7P50613 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDK7P50613 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDK7P50613 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDK7P50613 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDK7P50613 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDK7P50613 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CDK7P50613 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDK7P50613 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.21■□□□□ 0.83
CDK7P50613 IGHV3-22-201ENST00000520721 359 ntBASIC20.21■□□□□ 0.83
CDK7P50613 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDK7P50613 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.21■□□□□ 0.83
CDK7P50613 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDK7P50613 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDK7P50613 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.21■□□□□ 0.83
CDK7P50613 HEIH-201ENST00000623091 1652 ntBASIC20.21■□□□□ 0.83
CDK7P50613 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDK7P50613 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDK7P50613 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.21■□□□□ 0.83
CDK7P50613 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms