Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox18P43680 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox18P43680 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sox18P43680 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox18P43680 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox18P43680 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sox18P43680 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox18P43680 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox18P43680 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox18P43680 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.8□□□□□ -0.04
Sox18P43680 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox18P43680 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox18P43680 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox18P43680 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sox18P43680 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox18P43680 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC14.8□□□□□ -0.04
Sox18P43680 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox18P43680 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.8□□□□□ -0.04
Sox18P43680 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
Sox18P43680 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox18P43680 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Sox18P43680 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox18P43680 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox18P43680 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sox18P43680 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.8□□□□□ -0.04
Sox18P43680 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sox18P43680 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox18P43680 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Sox18P43680 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.8□□□□□ -0.04
Sox18P43680 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sox18P43680 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox18P43680 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox18P43680 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox18P43680 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox18P43680 Gm12151-201ENSMUST00000121374 290 ntBASIC14.79□□□□□ -0.04
Sox18P43680 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Sox18P43680 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.79□□□□□ -0.04
Sox18P43680 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox18P43680 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.79□□□□□ -0.04
Sox18P43680 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.79□□□□□ -0.04
Sox18P43680 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sox18P43680 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox18P43680 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.79□□□□□ -0.04
Sox18P43680 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox18P43680 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox18P43680 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox18P43680 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sox18P43680 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox18P43680 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox18P43680 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox18P43680 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Sox18P43680 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox18P43680 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox18P43680 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox18P43680 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox18P43680 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sox18P43680 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.78□□□□□ -0.04
Sox18P43680 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox18P43680 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox18P43680 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox18P43680 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sox18P43680 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.78□□□□□ -0.04
Sox18P43680 Rpph1-201ENSMUST00000175096 319 ntBASIC14.78□□□□□ -0.04
Sox18P43680 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox18P43680 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.78□□□□□ -0.04
Sox18P43680 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox18P43680 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox18P43680 Gm2423-201ENSMUST00000074863 733 ntBASIC14.78□□□□□ -0.04
Sox18P43680 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox18P43680 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox18P43680 Haglr-201ENSMUST00000100000 2085 ntBASIC14.78□□□□□ -0.04
Sox18P43680 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.78□□□□□ -0.04
Sox18P43680 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox18P43680 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox18P43680 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sox18P43680 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sox18P43680 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox18P43680 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox18P43680 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox18P43680 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox18P43680 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox18P43680 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox18P43680 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox18P43680 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox18P43680 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sox18P43680 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox18P43680 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
Sox18P43680 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox18P43680 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox18P43680 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox18P43680 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sox18P43680 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sox18P43680 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.77□□□□□ -0.05
Sox18P43680 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.77□□□□□ -0.05
Sox18P43680 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Sox18P43680 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox18P43680 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox18P43680 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox18P43680 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox18P43680 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms