Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLCN1P35523 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCN1P35523 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.89■□□□□ 0.93
CLCN1P35523 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.89■□□□□ 0.93
CLCN1P35523 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.89■□□□□ 0.93
CLCN1P35523 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCN1P35523 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCN1P35523 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.89■□□□□ 0.93
CLCN1P35523 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CLCN1P35523 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CLCN1P35523 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLCN1P35523 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC20.89■□□□□ 0.93
CLCN1P35523 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCN1P35523 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCN1P35523 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CLCN1P35523 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLCN1P35523 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLCN1P35523 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCN1P35523 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC20.88■□□□□ 0.93
CLCN1P35523 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
CLCN1P35523 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CLCN1P35523 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCN1P35523 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CLCN1P35523 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCN1P35523 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.88■□□□□ 0.93
CLCN1P35523 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CLCN1P35523 RNA5SP413-201ENST00000516373 109 ntBASIC20.88■□□□□ 0.93
CLCN1P35523 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
CLCN1P35523 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLCN1P35523 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CLCN1P35523 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLCN1P35523 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.88■□□□□ 0.93
CLCN1P35523 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCN1P35523 LINC00602-201ENST00000629776 2065 ntBASIC20.88■□□□□ 0.93
CLCN1P35523 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
CLCN1P35523 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC20.88■□□□□ 0.93
CLCN1P35523 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCN1P35523 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.88■□□□□ 0.93
CLCN1P35523 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.88■□□□□ 0.93
CLCN1P35523 AP006587.1-201ENST00000534129 1502 ntBASIC20.88■□□□□ 0.93
CLCN1P35523 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLCN1P35523 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC20.88■□□□□ 0.93
CLCN1P35523 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN1P35523 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN1P35523 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN1P35523 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN1P35523 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN1P35523 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN1P35523 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN1P35523 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN1P35523 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CLCN1P35523 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CLCN1P35523 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN1P35523 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN1P35523 POM121L13P-201ENST00000422362 380 ntBASIC20.87■□□□□ 0.93
CLCN1P35523 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
CLCN1P35523 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.87■□□□□ 0.93
CLCN1P35523 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN1P35523 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.87■□□□□ 0.93
CLCN1P35523 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.87■□□□□ 0.93
CLCN1P35523 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN1P35523 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN1P35523 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN1P35523 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.87■□□□□ 0.93
CLCN1P35523 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCN1P35523 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.86■□□□□ 0.93
CLCN1P35523 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCN1P35523 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.86■□□□□ 0.93
CLCN1P35523 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCN1P35523 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCN1P35523 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CLCN1P35523 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCN1P35523 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
CLCN1P35523 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
CLCN1P35523 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLCN1P35523 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCN1P35523 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLCN1P35523 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLCN1P35523 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC20.86■□□□□ 0.93
CLCN1P35523 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCN1P35523 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCN1P35523 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.86■□□□□ 0.93
CLCN1P35523 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.86■□□□□ 0.93
CLCN1P35523 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.86■□□□□ 0.93
CLCN1P35523 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.86■□□□□ 0.93
CLCN1P35523 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.86■□□□□ 0.93
CLCN1P35523 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.86■□□□□ 0.93
CLCN1P35523 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CLCN1P35523 KRT18P6-201ENST00000555540 1265 ntBASIC20.86■□□□□ 0.93
CLCN1P35523 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.86■□□□□ 0.93
CLCN1P35523 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLCN1P35523 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.86■□□□□ 0.93
CLCN1P35523 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.86■□□□□ 0.93
CLCN1P35523 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.86■□□□□ 0.93
CLCN1P35523 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCN1P35523 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCN1P35523 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CLCN1P35523 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CLCN1P35523 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCN1P35523 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms