Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 MIR574-201ENST00000385209 96 ntBASIC20.78■□□□□ 0.92
COL11A1P12107 AC112698.1-201ENST00000510299 916 ntBASIC20.78■□□□□ 0.92
COL11A1P12107 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.78■□□□□ 0.92
COL11A1P12107 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.78■□□□□ 0.92
COL11A1P12107 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
COL11A1P12107 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL11A1P12107 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
COL11A1P12107 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
COL11A1P12107 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.77■□□□□ 0.92
COL11A1P12107 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL11A1P12107 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL11A1P12107 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.77■□□□□ 0.92
COL11A1P12107 MTCL1P1-201ENST00000446207 792 ntBASIC20.77■□□□□ 0.92
COL11A1P12107 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.77■□□□□ 0.92
COL11A1P12107 AF228730.7-201ENST00000641842 219 ntBASIC20.77■□□□□ 0.92
COL11A1P12107 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL11A1P12107 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL11A1P12107 TP73-AS1-210ENST00000637775 1455 ntBASIC20.77■□□□□ 0.92
COL11A1P12107 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.77■□□□□ 0.92
COL11A1P12107 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL11A1P12107 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
COL11A1P12107 AP005117.1-201ENST00000584346 1413 ntBASIC20.77■□□□□ 0.91
COL11A1P12107 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
COL11A1P12107 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL11A1P12107 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.76■□□□□ 0.91
COL11A1P12107 AC068472.1-201ENST00000474589 881 ntBASIC20.76■□□□□ 0.91
COL11A1P12107 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.76■□□□□ 0.91
COL11A1P12107 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.76■□□□□ 0.91
COL11A1P12107 AL355877.3-201ENST00000622820 899 ntBASIC20.76■□□□□ 0.91
COL11A1P12107 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.76■□□□□ 0.91
COL11A1P12107 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL11A1P12107 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL11A1P12107 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.76■□□□□ 0.91
COL11A1P12107 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
COL11A1P12107 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.76■□□□□ 0.91
COL11A1P12107 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.76■□□□□ 0.91
COL11A1P12107 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL11A1P12107 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
COL11A1P12107 HNRNPDP1-201ENST00000439535 754 ntBASIC20.76■□□□□ 0.91
COL11A1P12107 AF186996.4-201ENST00000467186 377 ntBASIC20.76■□□□□ 0.91
COL11A1P12107 SART3-203ENST00000546611 1184 ntBASIC20.76■□□□□ 0.91
COL11A1P12107 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.76■□□□□ 0.91
COL11A1P12107 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.76■□□□□ 0.91
COL11A1P12107 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.76■□□□□ 0.91
COL11A1P12107 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.76■□□□□ 0.91
COL11A1P12107 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL11A1P12107 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL11A1P12107 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.76■□□□□ 0.91
COL11A1P12107 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
COL11A1P12107 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.75■□□□□ 0.91
COL11A1P12107 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL11A1P12107 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.75■□□□□ 0.91
COL11A1P12107 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.75■□□□□ 0.91
COL11A1P12107 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
COL11A1P12107 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.75■□□□□ 0.91
COL11A1P12107 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL11A1P12107 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
COL11A1P12107 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL11A1P12107 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL11A1P12107 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL11A1P12107 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.75■□□□□ 0.91
COL11A1P12107 IGHV3-22-201ENST00000520721 359 ntBASIC20.75■□□□□ 0.91
COL11A1P12107 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL11A1P12107 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.75■□□□□ 0.91
COL11A1P12107 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.75■□□□□ 0.91
COL11A1P12107 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.75■□□□□ 0.91
COL11A1P12107 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.75■□□□□ 0.91
COL11A1P12107 AC008687.5-201ENST00000593746 558 ntBASIC20.75■□□□□ 0.91
COL11A1P12107 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.75■□□□□ 0.91
COL11A1P12107 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
COL11A1P12107 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
COL11A1P12107 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.75■□□□□ 0.91
COL11A1P12107 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
COL11A1P12107 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL11A1P12107 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL11A1P12107 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL11A1P12107 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL11A1P12107 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
COL11A1P12107 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.74■□□□□ 0.91
COL11A1P12107 SCARNA2-201ENST00000458748 420 ntBASIC20.74■□□□□ 0.91
COL11A1P12107 AC139887.3-201ENST00000568585 713 ntBASIC20.74■□□□□ 0.91
COL11A1P12107 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
COL11A1P12107 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.74■□□□□ 0.91
COL11A1P12107 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
COL11A1P12107 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.74■□□□□ 0.91
COL11A1P12107 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL11A1P12107 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL11A1P12107 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL11A1P12107 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL11A1P12107 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL11A1P12107 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.74■□□□□ 0.91
COL11A1P12107 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL11A1P12107 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.74■□□□□ 0.91
COL11A1P12107 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL11A1P12107 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.74■□□□□ 0.91
COL11A1P12107 RCN1P2-201ENST00000398357 915 ntBASIC20.74■□□□□ 0.91
COL11A1P12107 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.74■□□□□ 0.91
COL11A1P12107 AL590627.1-203ENST00000421194 1026 ntBASIC20.74■□□□□ 0.91
COL11A1P12107 KRT18P65-201ENST00000439811 1286 ntBASIC20.74■□□□□ 0.91
COL11A1P12107 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms