Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CD4P01730 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.24■□□□□ 0.83
CD4P01730 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CD4P01730 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.24■□□□□ 0.83
CD4P01730 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.24■□□□□ 0.83
CD4P01730 AL355877.3-201ENST00000622820 899 ntBASIC20.24■□□□□ 0.83
CD4P01730 AC116562.4-201ENST00000641316 2276 ntBASIC20.24■□□□□ 0.83
CD4P01730 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.24■□□□□ 0.83
CD4P01730 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD4P01730 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD4P01730 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CD4P01730 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
CD4P01730 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CD4P01730 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD4P01730 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD4P01730 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CD4P01730 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CD4P01730 MIR1233-2-201ENST00000408138 82 ntBASIC20.23■□□□□ 0.83
CD4P01730 MIR1233-1-201ENST00000408722 82 ntBASIC20.23■□□□□ 0.83
CD4P01730 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.23■□□□□ 0.83
CD4P01730 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CD4P01730 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.23■□□□□ 0.83
CD4P01730 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.23■□□□□ 0.83
CD4P01730 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.23■□□□□ 0.83
CD4P01730 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CD4P01730 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.23■□□□□ 0.83
CD4P01730 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD4P01730 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.23■□□□□ 0.83
CD4P01730 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.22■□□□□ 0.83
CD4P01730 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CD4P01730 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD4P01730 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CD4P01730 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD4P01730 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD4P01730 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CD4P01730 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CD4P01730 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD4P01730 RCN1P2-201ENST00000398357 915 ntBASIC20.22■□□□□ 0.83
CD4P01730 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.22■□□□□ 0.83
CD4P01730 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CD4P01730 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CD4P01730 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.22■□□□□ 0.83
CD4P01730 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.22■□□□□ 0.83
CD4P01730 FGFR3P6-201ENST00000457012 610 ntBASIC20.22■□□□□ 0.83
CD4P01730 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CD4P01730 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD4P01730 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.22■□□□□ 0.83
CD4P01730 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.22■□□□□ 0.83
CD4P01730 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.22■□□□□ 0.83
CD4P01730 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.22■□□□□ 0.83
CD4P01730 FAM215A-202ENST00000632077 792 ntBASIC20.22■□□□□ 0.83
CD4P01730 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CD4P01730 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.22■□□□□ 0.83
CD4P01730 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.22■□□□□ 0.83
CD4P01730 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD4P01730 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD4P01730 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CD4P01730 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CD4P01730 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.21■□□□□ 0.83
CD4P01730 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.21■□□□□ 0.83
CD4P01730 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CD4P01730 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CD4P01730 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CD4P01730 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.21■□□□□ 0.83
CD4P01730 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD4P01730 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD4P01730 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
CD4P01730 HNRNPDP1-201ENST00000439535 754 ntBASIC20.21■□□□□ 0.83
CD4P01730 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.21■□□□□ 0.83
CD4P01730 KRT18P41-201ENST00000518924 1277 ntBASIC20.21■□□□□ 0.83
CD4P01730 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.21■□□□□ 0.83
CD4P01730 AC005336.2-201ENST00000593183 939 ntBASIC20.21■□□□□ 0.83
CD4P01730 TERC-201ENST00000602385 541 ntBASIC20.21■□□□□ 0.83
CD4P01730 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.21■□□□□ 0.83
CD4P01730 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.21■□□□□ 0.83
CD4P01730 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CD4P01730 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.21■□□□□ 0.83
CD4P01730 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CD4P01730 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.21■□□□□ 0.83
CD4P01730 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CD4P01730 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.21■□□□□ 0.83
CD4P01730 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD4P01730 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD4P01730 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD4P01730 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CD4P01730 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CD4P01730 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CD4P01730 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CD4P01730 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CD4P01730 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD4P01730 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD4P01730 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD4P01730 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CD4P01730 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.2■□□□□ 0.82
CD4P01730 AL161938.1-201ENST00000569833 2180 ntBASIC20.2■□□□□ 0.82
CD4P01730 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD4P01730 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD4P01730 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.2■□□□□ 0.82
CD4P01730 SCARNA2-201ENST00000458748 420 ntBASIC20.2■□□□□ 0.82
CD4P01730 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms