Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 AC128676.1-201ENST00000454392 318 ntBASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SLC52A3Q9NQ40 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 AC116562.2-201ENST00000507042 360 ntBASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 RPPH1-201ENST00000516869 333 ntBASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 C1QBPP2-201ENST00000528754 825 ntBASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 MIR3180-5-201ENST00000583743 153 ntBASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 AC012313.1-201ENST00000593393 3059 ntBASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC52A3Q9NQ40 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 HOXB1-202ENST00000577092 1414 ntBASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 CA15P1-201ENST00000481698 905 ntBASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SLC52A3Q9NQ40 AC020763.4-201ENST00000623414 4170 ntBASIC17.37■□□□□ 0.37
SLC52A3Q9NQ40 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC52A3Q9NQ40 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.37■□□□□ 0.37
SLC52A3Q9NQ40 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC52A3Q9NQ40 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC52A3Q9NQ40 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC52A3Q9NQ40 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC52A3Q9NQ40 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC52A3Q9NQ40 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC52A3Q9NQ40 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC52A3Q9NQ40 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SLC52A3Q9NQ40 ABHD17AP1-201ENST00000358206 933 ntBASIC17.37■□□□□ 0.37
SLC52A3Q9NQ40 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC52A3Q9NQ40 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.37■□□□□ 0.37
SLC52A3Q9NQ40 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC52A3Q9NQ40 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC52A3Q9NQ40 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SLC52A3Q9NQ40 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms