Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chrna3Q8R4G9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chrna3Q8R4G9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Chrna3Q8R4G9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Chrna3Q8R4G9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chrna3Q8R4G9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chrna3Q8R4G9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chrna3Q8R4G9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Gm5364-201ENSMUST00000216789 889 ntBASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Chrna3Q8R4G9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Psmb5-202ENSMUST00000227257 622 ntBASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Chrna3Q8R4G9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.18■□□□□ 0.02
Chrna3Q8R4G9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms