Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH7O60245 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCDH7O60245 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH7O60245 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH7O60245 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH7O60245 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH7O60245 HOXB1-202ENST00000577092 1414 ntBASIC17.57■□□□□ 0.4
PCDH7O60245 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH7O60245 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH7O60245 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH7O60245 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH7O60245 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.57■□□□□ 0.4
PCDH7O60245 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH7O60245 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH7O60245 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCDH7O60245 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH7O60245 TSPY14P-201ENST00000303979 915 ntBASIC17.57■□□□□ 0.4
PCDH7O60245 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH7O60245 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDH7O60245 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH7O60245 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH7O60245 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDH7O60245 TSPY15P-201ENST00000457163 923 ntBASIC17.57■□□□□ 0.4
PCDH7O60245 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH7O60245 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDH7O60245 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDH7O60245 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH7O60245 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
PCDH7O60245 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH7O60245 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH7O60245 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
PCDH7O60245 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH7O60245 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDH7O60245 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH7O60245 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH7O60245 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PCDH7O60245 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH7O60245 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH7O60245 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH7O60245 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH7O60245 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH7O60245 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH7O60245 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH7O60245 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PCDH7O60245 KRT8P7-201ENST00000533003 1432 ntBASIC17.56■□□□□ 0.4
PCDH7O60245 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH7O60245 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PCDH7O60245 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCDH7O60245 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH7O60245 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH7O60245 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH7O60245 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH7O60245 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
PCDH7O60245 EGLN1P1-201ENST00000531623 762 ntBASIC17.56■□□□□ 0.4
PCDH7O60245 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.56■□□□□ 0.4
PCDH7O60245 AC010653.2-201ENST00000623505 997 ntBASIC17.56■□□□□ 0.4
PCDH7O60245 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH7O60245 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH7O60245 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH7O60245 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH7O60245 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH7O60245 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDH7O60245 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDH7O60245 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH7O60245 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH7O60245 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH7O60245 AL163051.1-201ENST00000569214 1512 ntBASIC17.56■□□□□ 0.4
PCDH7O60245 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH7O60245 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDH7O60245 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH7O60245 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PCDH7O60245 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH7O60245 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH7O60245 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH7O60245 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH7O60245 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDH7O60245 GMCL1P1-201ENST00000463439 1581 ntBASIC17.55■□□□□ 0.4
PCDH7O60245 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH7O60245 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDH7O60245 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PCDH7O60245 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.55■□□□□ 0.4
PCDH7O60245 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDH7O60245 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.55■□□□□ 0.4
PCDH7O60245 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDH7O60245 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH7O60245 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PCDH7O60245 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDH7O60245 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDH7O60245 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH7O60245 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDH7O60245 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH7O60245 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH7O60245 CYP2D8P-201ENST00000433633 1490 ntBASIC17.55■□□□□ 0.4
PCDH7O60245 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH7O60245 AC009102.3-201ENST00000623118 1491 ntBASIC17.55■□□□□ 0.4
PCDH7O60245 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH7O60245 KRT8P9-201ENST00000558927 1449 ntBASIC17.55■□□□□ 0.4
PCDH7O60245 NOC2LP2-201ENST00000407594 1944 ntBASIC17.55■□□□□ 0.4
PCDH7O60245 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDH7O60245 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms