Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.46■□□□□ 0.38
UPK1AO00322 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
UPK1AO00322 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1AO00322 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1AO00322 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1AO00322 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
UPK1AO00322 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1AO00322 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1AO00322 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
UPK1AO00322 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1AO00322 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1AO00322 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1AO00322 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.45■□□□□ 0.38
UPK1AO00322 SLC25A6P5-201ENST00000435663 894 ntBASIC17.45■□□□□ 0.38
UPK1AO00322 MCCD1P1-208ENST00000445732 328 ntBASIC17.45■□□□□ 0.38
UPK1AO00322 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.45■□□□□ 0.38
UPK1AO00322 MIR4674-201ENST00000582457 87 ntBASIC17.45■□□□□ 0.38
UPK1AO00322 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1AO00322 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.45■□□□□ 0.38
UPK1AO00322 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1AO00322 AC093677.2-201ENST00000600169 1863 ntBASIC17.45■□□□□ 0.38
UPK1AO00322 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1AO00322 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
UPK1AO00322 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1AO00322 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1AO00322 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1AO00322 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1AO00322 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPK1AO00322 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPK1AO00322 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
UPK1AO00322 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
UPK1AO00322 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
UPK1AO00322 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.44■□□□□ 0.38
UPK1AO00322 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UPK1AO00322 AC009053.2-201ENST00000563701 2365 ntBASIC17.44■□□□□ 0.38
UPK1AO00322 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPK1AO00322 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.44■□□□□ 0.38
UPK1AO00322 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPK1AO00322 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UPK1AO00322 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.44■□□□□ 0.38
UPK1AO00322 AL353719.1-201ENST00000566847 864 ntBASIC17.44■□□□□ 0.38
UPK1AO00322 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.44■□□□□ 0.38
UPK1AO00322 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.44■□□□□ 0.38
UPK1AO00322 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.44■□□□□ 0.38
UPK1AO00322 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPK1AO00322 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.44■□□□□ 0.38
UPK1AO00322 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPK1AO00322 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.44■□□□□ 0.38
UPK1AO00322 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPK1AO00322 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
UPK1AO00322 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPK1AO00322 AC099398.1-201ENST00000567919 2776 ntBASIC17.44■□□□□ 0.38
UPK1AO00322 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.44■□□□□ 0.38
UPK1AO00322 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
UPK1AO00322 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPK1AO00322 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
UPK1AO00322 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.43■□□□□ 0.38
UPK1AO00322 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1AO00322 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1AO00322 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
UPK1AO00322 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.43■□□□□ 0.38
UPK1AO00322 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.43■□□□□ 0.38
UPK1AO00322 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.43■□□□□ 0.38
UPK1AO00322 MIR564-202ENST00000385049 94 ntBASIC17.43■□□□□ 0.38
UPK1AO00322 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1AO00322 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
UPK1AO00322 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.43■□□□□ 0.38
UPK1AO00322 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.43■□□□□ 0.38
UPK1AO00322 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.43■□□□□ 0.38
UPK1AO00322 TSPY17P-201ENST00000450329 467 ntBASIC17.43■□□□□ 0.38
UPK1AO00322 AP003041.3-201ENST00000527151 707 ntBASIC17.43■□□□□ 0.38
UPK1AO00322 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.43■□□□□ 0.38
UPK1AO00322 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1AO00322 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.43■□□□□ 0.38
UPK1AO00322 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.43■□□□□ 0.38
UPK1AO00322 KRT8P45-201ENST00000414328 1447 ntBASIC17.43■□□□□ 0.38
UPK1AO00322 AC092338.2-201ENST00000568827 1415 ntBASIC17.43■□□□□ 0.38
UPK1AO00322 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1AO00322 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1AO00322 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.43■□□□□ 0.38
UPK1AO00322 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UPK1AO00322 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
UPK1AO00322 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPK1AO00322 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UPK1AO00322 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
UPK1AO00322 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.42■□□□□ 0.38
UPK1AO00322 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UPK1AO00322 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.42■□□□□ 0.38
UPK1AO00322 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPK1AO00322 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPK1AO00322 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPK1AO00322 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
UPK1AO00322 KRT8P9-201ENST00000558927 1449 ntBASIC17.42■□□□□ 0.38
UPK1AO00322 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPK1AO00322 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
UPK1AO00322 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.42■□□□□ 0.38
UPK1AO00322 CCR12P-201ENST00000446203 998 ntBASIC17.42■□□□□ 0.38
UPK1AO00322 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.42■□□□□ 0.38
UPK1AO00322 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
UPK1AO00322 C2orf69P3-201ENST00000565542 1120 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms