Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav4n-4A0A075B615 Gm8784-201ENSMUST00000222096 1435 ntBASIC10.77□□□□□ -0.68
Trav4n-4A0A075B615 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Alkbh1-212ENSMUST00000185301 408 ntBASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav4n-4A0A075B615 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Ap5m1-205ENSMUST00000227431 3757 ntBASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Gm18025-201ENSMUST00000221733 862 ntBASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Il3ra-202ENSMUST00000223589 738 ntBASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Trav4n-4A0A075B615 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Zfp264-201ENSMUST00000208656 1563 ntBASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Gm26524-201ENSMUST00000192339 390 ntBASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Gm21168-201ENSMUST00000199646 1096 ntBASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 AC120002.2-201ENSMUST00000220205 773 ntBASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Rab3c-203ENSMUST00000224180 967 ntBASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Gm4968-201ENSMUST00000071458 858 ntBASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms