Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 AP003733.1-201ENST00000491725 852 ntBASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 LINC01711-201ENST00000598340 967 ntBASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 AL121772.3-201ENST00000610840 674 ntBASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SSX2IPQ9Y2D8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 AC125437.2-201ENST00000625180 2167 ntBASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 TPSP2-201ENST00000561760 610 ntBASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.77■□□□□ 0.76
SSX2IPQ9Y2D8 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.77■□□□□ 0.75
SSX2IPQ9Y2D8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SSX2IPQ9Y2D8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SSX2IPQ9Y2D8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 AC012615.1-201ENST00000565797 1299 ntBASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 RNF126P1-202ENST00000569893 925 ntBASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 AC098818.2-201ENST00000564925 2320 ntBASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSX2IPQ9Y2D8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 LINC00265-3P-201ENST00000447588 903 ntBASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSX2IPQ9Y2D8 AC005332.3-201ENST00000589904 676 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms