Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 AL357033.4-201ENST00000617703 1807 ntBASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 RCN1P2-201ENST00000398357 915 ntBASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 AC092183.1-201ENST00000469884 875 ntBASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 MIR7706-201ENST00000613747 67 ntBASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 AL355877.3-201ENST00000622820 899 ntBASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNRNP40Q96DI7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SNRNP40Q96DI7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNRNP40Q96DI7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNRNP40Q96DI7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.52■□□□□ 0.23
SNRNP40Q96DI7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNRNP40Q96DI7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.52■□□□□ 0.23
SNRNP40Q96DI7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SNRNP40Q96DI7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 ZNF259P1-201ENST00000407656 1365 ntBASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 AL163051.1-201ENST00000569214 1512 ntBASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 BX842568.4-201ENST00000421222 227 ntBASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNRNP40Q96DI7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
SNRNP40Q96DI7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms