Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.02□□□□□ -0.01
Pcdh18Q8VHR0 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh18Q8VHR0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.02□□□□□ -0.01
Pcdh18Q8VHR0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh18Q8VHR0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh18Q8VHR0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh18Q8VHR0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.02□□□□□ -0.01
Pcdh18Q8VHR0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Pcdh18Q8VHR0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.02□□□□□ -0.01
Pcdh18Q8VHR0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh18Q8VHR0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh18Q8VHR0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Sybu-209ENSMUST00000228639 4113 ntBASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.01□□□□□ -0.01
Pcdh18Q8VHR0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 AC122351.1-201ENSMUST00000220467 126 ntBASIC15□□□□□ -0.01
Pcdh18Q8VHR0 AC159205.3-201ENSMUST00000224614 874 ntBASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Pcdh18Q8VHR0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh18Q8VHR0 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms