Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm3P62311 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm3P62311 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm3P62311 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm3P62311 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Lsm3P62311 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm3P62311 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm3P62311 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm3P62311 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lsm3P62311 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm3P62311 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm3P62311 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm3P62311 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Lsm3P62311 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm3P62311 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.22□□□□□ -0.13
Lsm3P62311 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm3P62311 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm3P62311 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm3P62311 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm3P62311 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm3P62311 Mir5133-201ENSMUST00000174955 77 ntBASIC14.22□□□□□ -0.13
Lsm3P62311 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Lsm3P62311 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Lsm3P62311 Gm36967-201ENSMUST00000193814 266 ntBASIC14.22□□□□□ -0.13
Lsm3P62311 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Lsm3P62311 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm3P62311 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Lsm3P62311 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.22□□□□□ -0.13
Lsm3P62311 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm3P62311 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm3P62311 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Lsm3P62311 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lsm3P62311 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Lsm3P62311 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm3P62311 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm3P62311 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm3P62311 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm3P62311 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm3P62311 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm3P62311 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm3P62311 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Lsm3P62311 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm3P62311 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.21□□□□□ -0.13
Lsm3P62311 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.21□□□□□ -0.13
Lsm3P62311 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Lsm3P62311 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm3P62311 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.21□□□□□ -0.13
Lsm3P62311 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm3P62311 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm3P62311 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm3P62311 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.21□□□□□ -0.13
Lsm3P62311 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.21□□□□□ -0.13
Lsm3P62311 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm3P62311 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Lsm3P62311 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.21□□□□□ -0.13
Lsm3P62311 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lsm3P62311 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lsm3P62311 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lsm3P62311 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.21□□□□□ -0.14
Lsm3P62311 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Lsm3P62311 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.2□□□□□ -0.14
Lsm3P62311 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Lsm3P62311 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Gm12085-201ENSMUST00000119263 940 ntBASIC14.2□□□□□ -0.14
Lsm3P62311 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Gm43183-201ENSMUST00000200632 547 ntBASIC14.2□□□□□ -0.14
Lsm3P62311 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Il3ra-202ENSMUST00000223589 738 ntBASIC14.2□□□□□ -0.14
Lsm3P62311 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.2□□□□□ -0.14
Lsm3P62311 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lsm3P62311 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms