Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TM4SF4P48230 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TM4SF4P48230 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TM4SF4P48230 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TM4SF4P48230 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
TM4SF4P48230 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TM4SF4P48230 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TM4SF4P48230 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TM4SF4P48230 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.94■□□□□ 0.94
TM4SF4P48230 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TM4SF4P48230 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TM4SF4P48230 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.94■□□□□ 0.94
TM4SF4P48230 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TM4SF4P48230 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TM4SF4P48230 AC073621.1-201ENST00000392730 636 ntBASIC20.94■□□□□ 0.94
TM4SF4P48230 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.94■□□□□ 0.94
TM4SF4P48230 ALG1L5P-201ENST00000482043 771 ntBASIC20.94■□□□□ 0.94
TM4SF4P48230 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.94■□□□□ 0.94
TM4SF4P48230 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TM4SF4P48230 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TM4SF4P48230 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TM4SF4P48230 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TM4SF4P48230 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
TM4SF4P48230 MIR1199-201ENST00000621445 119 ntBASIC20.94■□□□□ 0.94
TM4SF4P48230 C20orf181-201ENST00000623918 480 ntBASIC20.94■□□□□ 0.94
TM4SF4P48230 AC005593.1-201ENST00000624894 515 ntBASIC20.94■□□□□ 0.94
TM4SF4P48230 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TM4SF4P48230 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TM4SF4P48230 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.94■□□□□ 0.94
TM4SF4P48230 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.94■□□□□ 0.94
TM4SF4P48230 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TM4SF4P48230 AC002310.6-201ENST00000624451 1377 ntBASIC20.94■□□□□ 0.94
TM4SF4P48230 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
TM4SF4P48230 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.94■□□□□ 0.94
TM4SF4P48230 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TM4SF4P48230 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TM4SF4P48230 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.94■□□□□ 0.94
TM4SF4P48230 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.93■□□□□ 0.94
TM4SF4P48230 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF4P48230 HEIH-201ENST00000623091 1652 ntBASIC20.93■□□□□ 0.94
TM4SF4P48230 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF4P48230 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF4P48230 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF4P48230 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF4P48230 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF4P48230 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TM4SF4P48230 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.93■□□□□ 0.94
TM4SF4P48230 COX20P2-201ENST00000452636 358 ntBASIC20.93■□□□□ 0.94
TM4SF4P48230 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF4P48230 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.93■□□□□ 0.94
TM4SF4P48230 AC011467.4-201ENST00000594891 528 ntBASIC20.93■□□□□ 0.94
TM4SF4P48230 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TM4SF4P48230 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TM4SF4P48230 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TM4SF4P48230 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TM4SF4P48230 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF4P48230 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF4P48230 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF4P48230 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TM4SF4P48230 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF4P48230 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.92■□□□□ 0.94
TM4SF4P48230 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
TM4SF4P48230 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF4P48230 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF4P48230 AC108751.1-201ENST00000490852 363 ntBASIC20.92■□□□□ 0.94
TM4SF4P48230 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.92■□□□□ 0.94
TM4SF4P48230 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.92■□□□□ 0.94
TM4SF4P48230 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TM4SF4P48230 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.92■□□□□ 0.94
TM4SF4P48230 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF4P48230 AC097374.2-201ENST00000618617 1306 ntBASIC20.92■□□□□ 0.94
TM4SF4P48230 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF4P48230 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.92■□□□□ 0.94
TM4SF4P48230 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF4P48230 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF4P48230 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF4P48230 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF4P48230 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.92■□□□□ 0.94
TM4SF4P48230 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF4P48230 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TM4SF4P48230 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TM4SF4P48230 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TM4SF4P48230 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
TM4SF4P48230 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TM4SF4P48230 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TM4SF4P48230 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TM4SF4P48230 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.91■□□□□ 0.94
TM4SF4P48230 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.91■□□□□ 0.94
TM4SF4P48230 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TM4SF4P48230 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.91■□□□□ 0.94
TM4SF4P48230 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.91■□□□□ 0.94
TM4SF4P48230 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.91■□□□□ 0.94
TM4SF4P48230 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TM4SF4P48230 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TM4SF4P48230 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
TM4SF4P48230 SPCS2P1-201ENST00000561636 679 ntBASIC20.91■□□□□ 0.94
TM4SF4P48230 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TM4SF4P48230 AC009102.3-201ENST00000623118 1491 ntBASIC20.91■□□□□ 0.94
TM4SF4P48230 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF4P48230 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms