Protein–RNA interactions for Protein: Q9Z0S2

Lhx2, LIM/homeobox protein Lhx2, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx2Q9Z0S2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.28■□□□□ 0.84
Lhx2Q9Z0S2 Gm5786-201ENSMUST00000085368 882 ntBASIC20.28■□□□□ 0.84
Lhx2Q9Z0S2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.28■□□□□ 0.84
Lhx2Q9Z0S2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lhx2Q9Z0S2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lhx2Q9Z0S2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Lhx2Q9Z0S2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lhx2Q9Z0S2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lhx2Q9Z0S2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lhx2Q9Z0S2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.27■□□□□ 0.83
Lhx2Q9Z0S2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lhx2Q9Z0S2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lhx2Q9Z0S2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lhx2Q9Z0S2 Gm27502-201ENSMUST00000183495 199 ntBASIC20.26■□□□□ 0.83
Lhx2Q9Z0S2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Lhx2Q9Z0S2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lhx2Q9Z0S2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lhx2Q9Z0S2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx2Q9Z0S2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx2Q9Z0S2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx2Q9Z0S2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx2Q9Z0S2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx2Q9Z0S2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lhx2Q9Z0S2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lhx2Q9Z0S2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lhx2Q9Z0S2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Lhx2Q9Z0S2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.24■□□□□ 0.83
Lhx2Q9Z0S2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lhx2Q9Z0S2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lhx2Q9Z0S2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Lhx2Q9Z0S2 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.23■□□□□ 0.83
Lhx2Q9Z0S2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lhx2Q9Z0S2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Lhx2Q9Z0S2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lhx2Q9Z0S2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.22■□□□□ 0.83
Lhx2Q9Z0S2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lhx2Q9Z0S2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lhx2Q9Z0S2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Lhx2Q9Z0S2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Lhx2Q9Z0S2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lhx2Q9Z0S2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Lhx2Q9Z0S2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lhx2Q9Z0S2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lhx2Q9Z0S2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Lhx2Q9Z0S2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
Lhx2Q9Z0S2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx2Q9Z0S2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.2■□□□□ 0.82
Lhx2Q9Z0S2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx2Q9Z0S2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx2Q9Z0S2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx2Q9Z0S2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx2Q9Z0S2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx2Q9Z0S2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.19■□□□□ 0.82
Lhx2Q9Z0S2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx2Q9Z0S2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx2Q9Z0S2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Lhx2Q9Z0S2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx2Q9Z0S2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx2Q9Z0S2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Lhx2Q9Z0S2 Gm14523-201ENSMUST00000117260 558 ntBASIC20.18■□□□□ 0.82
Lhx2Q9Z0S2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.18■□□□□ 0.82
Lhx2Q9Z0S2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx2Q9Z0S2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx2Q9Z0S2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx2Q9Z0S2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lhx2Q9Z0S2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.16■□□□□ 0.82
Lhx2Q9Z0S2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx2Q9Z0S2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx2Q9Z0S2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.16■□□□□ 0.82
Lhx2Q9Z0S2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.16■□□□□ 0.82
Lhx2Q9Z0S2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Lhx2Q9Z0S2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.16■□□□□ 0.82
Lhx2Q9Z0S2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lhx2Q9Z0S2 Gm7332-201ENSMUST00000118351 454 ntBASIC20.14■□□□□ 0.81
Lhx2Q9Z0S2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Lhx2Q9Z0S2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx2Q9Z0S2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.14■□□□□ 0.81
Lhx2Q9Z0S2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx2Q9Z0S2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.14■□□□□ 0.81
Lhx2Q9Z0S2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx2Q9Z0S2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx2Q9Z0S2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
Lhx2Q9Z0S2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx2Q9Z0S2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx2Q9Z0S2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx2Q9Z0S2 Gm44428-201ENSMUST00000204474 874 ntBASIC20.12■□□□□ 0.81
Lhx2Q9Z0S2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Lhx2Q9Z0S2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Lhx2Q9Z0S2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx2Q9Z0S2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx2Q9Z0S2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx2Q9Z0S2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx2Q9Z0S2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Lhx2Q9Z0S2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Lhx2Q9Z0S2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Lhx2Q9Z0S2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx2Q9Z0S2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx2Q9Z0S2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Lhx2Q9Z0S2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx2Q9Z0S2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms