Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdh20Q9Z0M3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdh20Q9Z0M3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Cdh20Q9Z0M3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.98■□□□□ 0.95
Cdh20Q9Z0M3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.98■□□□□ 0.95
Cdh20Q9Z0M3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdh20Q9Z0M3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdh20Q9Z0M3 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.97■□□□□ 0.95
Cdh20Q9Z0M3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh20Q9Z0M3 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.97■□□□□ 0.95
Cdh20Q9Z0M3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh20Q9Z0M3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh20Q9Z0M3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdh20Q9Z0M3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh20Q9Z0M3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh20Q9Z0M3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.96■□□□□ 0.95
Cdh20Q9Z0M3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh20Q9Z0M3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Cdh20Q9Z0M3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdh20Q9Z0M3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.95■□□□□ 0.94
Cdh20Q9Z0M3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cdh20Q9Z0M3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdh20Q9Z0M3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdh20Q9Z0M3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh20Q9Z0M3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh20Q9Z0M3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Cdh20Q9Z0M3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh20Q9Z0M3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh20Q9Z0M3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh20Q9Z0M3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
Cdh20Q9Z0M3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh20Q9Z0M3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Cdh20Q9Z0M3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh20Q9Z0M3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh20Q9Z0M3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh20Q9Z0M3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cdh20Q9Z0M3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cdh20Q9Z0M3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh20Q9Z0M3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cdh20Q9Z0M3 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.91■□□□□ 0.94
Cdh20Q9Z0M3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cdh20Q9Z0M3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Cdh20Q9Z0M3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh20Q9Z0M3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh20Q9Z0M3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh20Q9Z0M3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cdh20Q9Z0M3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cdh20Q9Z0M3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh20Q9Z0M3 Mir3960-201ENSMUST00000198213 73 ntBASIC20.89■□□□□ 0.93
Cdh20Q9Z0M3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh20Q9Z0M3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Cdh20Q9Z0M3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh20Q9Z0M3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh20Q9Z0M3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh20Q9Z0M3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh20Q9Z0M3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cdh20Q9Z0M3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Cdh20Q9Z0M3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh20Q9Z0M3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh20Q9Z0M3 Gm9812-201ENSMUST00000061934 968 ntBASIC20.86■□□□□ 0.93
Cdh20Q9Z0M3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh20Q9Z0M3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Cdh20Q9Z0M3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh20Q9Z0M3 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.85■□□□□ 0.93
Cdh20Q9Z0M3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh20Q9Z0M3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh20Q9Z0M3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh20Q9Z0M3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh20Q9Z0M3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.84■□□□□ 0.93
Cdh20Q9Z0M3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Cdh20Q9Z0M3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Cdh20Q9Z0M3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Cdh20Q9Z0M3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh20Q9Z0M3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh20Q9Z0M3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh20Q9Z0M3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
Cdh20Q9Z0M3 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.83■□□□□ 0.93
Cdh20Q9Z0M3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Cdh20Q9Z0M3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdh20Q9Z0M3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.82■□□□□ 0.92
Cdh20Q9Z0M3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh20Q9Z0M3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.82■□□□□ 0.92
Cdh20Q9Z0M3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh20Q9Z0M3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh20Q9Z0M3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh20Q9Z0M3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh20Q9Z0M3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh20Q9Z0M3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh20Q9Z0M3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Cdh20Q9Z0M3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.81■□□□□ 0.92
Cdh20Q9Z0M3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh20Q9Z0M3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.81■□□□□ 0.92
Cdh20Q9Z0M3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh20Q9Z0M3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Cdh20Q9Z0M3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh20Q9Z0M3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.79■□□□□ 0.92
Cdh20Q9Z0M3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.79■□□□□ 0.92
Cdh20Q9Z0M3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Cdh20Q9Z0M3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh20Q9Z0M3 Gm45364-201ENSMUST00000210883 159 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms