Protein–RNA interactions for Protein: Q9WU78

Pdcd6ip, Programmed cell death 6-interacting protein, mousemouse

Known RBP Predictions only

Length 869 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdcd6ipQ9WU78 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC26.49■■□□□ 1.83
Pdcd6ipQ9WU78 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.49■■□□□ 1.83
Pdcd6ipQ9WU78 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.49■■□□□ 1.83
Pdcd6ipQ9WU78 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pdcd6ipQ9WU78 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.49■■□□□ 1.83
Pdcd6ipQ9WU78 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Pdcd6ipQ9WU78 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pdcd6ipQ9WU78 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC26.49■■□□□ 1.83
Pdcd6ipQ9WU78 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Pdcd6ipQ9WU78 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
Pdcd6ipQ9WU78 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
Pdcd6ipQ9WU78 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.47■■□□□ 1.83
Pdcd6ipQ9WU78 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pdcd6ipQ9WU78 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.46■■□□□ 1.83
Pdcd6ipQ9WU78 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC26.46■■□□□ 1.83
Pdcd6ipQ9WU78 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Pdcd6ipQ9WU78 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.45■■□□□ 1.82
Pdcd6ipQ9WU78 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
Pdcd6ipQ9WU78 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pdcd6ipQ9WU78 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.44■■□□□ 1.82
Pdcd6ipQ9WU78 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.44■■□□□ 1.82
Pdcd6ipQ9WU78 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Pdcd6ipQ9WU78 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pdcd6ipQ9WU78 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pdcd6ipQ9WU78 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pdcd6ipQ9WU78 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26.43■■□□□ 1.82
Pdcd6ipQ9WU78 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Pdcd6ipQ9WU78 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Pdcd6ipQ9WU78 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pdcd6ipQ9WU78 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pdcd6ipQ9WU78 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC26.42■■□□□ 1.82
Pdcd6ipQ9WU78 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pdcd6ipQ9WU78 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pdcd6ipQ9WU78 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
Pdcd6ipQ9WU78 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pdcd6ipQ9WU78 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
Pdcd6ipQ9WU78 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Pdcd6ipQ9WU78 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pdcd6ipQ9WU78 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pdcd6ipQ9WU78 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.4■■□□□ 1.82
Pdcd6ipQ9WU78 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pdcd6ipQ9WU78 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pdcd6ipQ9WU78 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pdcd6ipQ9WU78 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pdcd6ipQ9WU78 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.81
Pdcd6ipQ9WU78 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Pdcd6ipQ9WU78 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pdcd6ipQ9WU78 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC26.38■■□□□ 1.81
Pdcd6ipQ9WU78 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pdcd6ipQ9WU78 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Pdcd6ipQ9WU78 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pdcd6ipQ9WU78 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pdcd6ipQ9WU78 Gm10420-201ENSMUST00000121713 882 ntBASIC26.36■■□□□ 1.81
Pdcd6ipQ9WU78 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pdcd6ipQ9WU78 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pdcd6ipQ9WU78 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Pdcd6ipQ9WU78 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Pdcd6ipQ9WU78 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pdcd6ipQ9WU78 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Pdcd6ipQ9WU78 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Pdcd6ipQ9WU78 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pdcd6ipQ9WU78 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pdcd6ipQ9WU78 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
Pdcd6ipQ9WU78 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Pdcd6ipQ9WU78 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pdcd6ipQ9WU78 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pdcd6ipQ9WU78 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pdcd6ipQ9WU78 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Pdcd6ipQ9WU78 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pdcd6ipQ9WU78 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Pdcd6ipQ9WU78 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Pdcd6ipQ9WU78 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC26.3■■□□□ 1.8
Pdcd6ipQ9WU78 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pdcd6ipQ9WU78 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.3■■□□□ 1.8
Pdcd6ipQ9WU78 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Pdcd6ipQ9WU78 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Pdcd6ipQ9WU78 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Pdcd6ipQ9WU78 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26.29■■□□□ 1.8
Pdcd6ipQ9WU78 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pdcd6ipQ9WU78 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pdcd6ipQ9WU78 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Pdcd6ipQ9WU78 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pdcd6ipQ9WU78 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pdcd6ipQ9WU78 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Pdcd6ipQ9WU78 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Pdcd6ipQ9WU78 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Pdcd6ipQ9WU78 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC26.25■■□□□ 1.79
Pdcd6ipQ9WU78 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Pdcd6ipQ9WU78 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Pdcd6ipQ9WU78 Gm44428-201ENSMUST00000204474 874 ntBASIC26.24■■□□□ 1.79
Pdcd6ipQ9WU78 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Pdcd6ipQ9WU78 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Pdcd6ipQ9WU78 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pdcd6ipQ9WU78 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Pdcd6ipQ9WU78 Gm4419-202ENSMUST00000226239 1431 ntBASIC26.22■■□□□ 1.79
Pdcd6ipQ9WU78 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC26.22■■□□□ 1.79
Pdcd6ipQ9WU78 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pdcd6ipQ9WU78 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pdcd6ipQ9WU78 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Pdcd6ipQ9WU78 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.21■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms