Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sec61a2Q9JLR1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
Sec61a2Q9JLR1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Sec61a2Q9JLR1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sec61a2Q9JLR1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.27■□□□□ 0.83
Sec61a2Q9JLR1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.26■□□□□ 0.83
Sec61a2Q9JLR1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sec61a2Q9JLR1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sec61a2Q9JLR1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.26■□□□□ 0.83
Sec61a2Q9JLR1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sec61a2Q9JLR1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sec61a2Q9JLR1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sec61a2Q9JLR1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sec61a2Q9JLR1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Sec61a2Q9JLR1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sec61a2Q9JLR1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sec61a2Q9JLR1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sec61a2Q9JLR1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sec61a2Q9JLR1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sec61a2Q9JLR1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sec61a2Q9JLR1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sec61a2Q9JLR1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sec61a2Q9JLR1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Sec61a2Q9JLR1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sec61a2Q9JLR1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sec61a2Q9JLR1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.22■□□□□ 0.83
Sec61a2Q9JLR1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sec61a2Q9JLR1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sec61a2Q9JLR1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sec61a2Q9JLR1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sec61a2Q9JLR1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sec61a2Q9JLR1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sec61a2Q9JLR1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Sec61a2Q9JLR1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.2■□□□□ 0.82
Sec61a2Q9JLR1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sec61a2Q9JLR1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sec61a2Q9JLR1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sec61a2Q9JLR1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sec61a2Q9JLR1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sec61a2Q9JLR1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sec61a2Q9JLR1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sec61a2Q9JLR1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sec61a2Q9JLR1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sec61a2Q9JLR1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sec61a2Q9JLR1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sec61a2Q9JLR1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.16■□□□□ 0.82
Sec61a2Q9JLR1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sec61a2Q9JLR1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Sec61a2Q9JLR1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sec61a2Q9JLR1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Sec61a2Q9JLR1 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.16■□□□□ 0.82
Sec61a2Q9JLR1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sec61a2Q9JLR1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sec61a2Q9JLR1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sec61a2Q9JLR1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sec61a2Q9JLR1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Sec61a2Q9JLR1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Sec61a2Q9JLR1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Sec61a2Q9JLR1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sec61a2Q9JLR1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sec61a2Q9JLR1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sec61a2Q9JLR1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sec61a2Q9JLR1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Sec61a2Q9JLR1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sec61a2Q9JLR1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sec61a2Q9JLR1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sec61a2Q9JLR1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.13■□□□□ 0.81
Sec61a2Q9JLR1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sec61a2Q9JLR1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sec61a2Q9JLR1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sec61a2Q9JLR1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sec61a2Q9JLR1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sec61a2Q9JLR1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sec61a2Q9JLR1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sec61a2Q9JLR1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sec61a2Q9JLR1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sec61a2Q9JLR1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sec61a2Q9JLR1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Sec61a2Q9JLR1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sec61a2Q9JLR1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Sec61a2Q9JLR1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Sec61a2Q9JLR1 Gm4799-201ENSMUST00000095396 657 ntBASIC20.11■□□□□ 0.81
Sec61a2Q9JLR1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sec61a2Q9JLR1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sec61a2Q9JLR1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Sec61a2Q9JLR1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Sec61a2Q9JLR1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Sec61a2Q9JLR1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.1■□□□□ 0.81
Sec61a2Q9JLR1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sec61a2Q9JLR1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sec61a2Q9JLR1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sec61a2Q9JLR1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sec61a2Q9JLR1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sec61a2Q9JLR1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sec61a2Q9JLR1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sec61a2Q9JLR1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sec61a2Q9JLR1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.07■□□□□ 0.8
Sec61a2Q9JLR1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.07■□□□□ 0.8
Sec61a2Q9JLR1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Sec61a2Q9JLR1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms