Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Scn5aQ9JJV9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Scn5aQ9JJV9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Scn5aQ9JJV9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Scn5aQ9JJV9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.15■■□□□ 1.46
Scn5aQ9JJV9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC24.15■■□□□ 1.46
Scn5aQ9JJV9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Scn5aQ9JJV9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Scn5aQ9JJV9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Scn5aQ9JJV9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Scn5aQ9JJV9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Scn5aQ9JJV9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Scn5aQ9JJV9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Scn5aQ9JJV9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Scn5aQ9JJV9 Gm44428-201ENSMUST00000204474 874 ntBASIC24.12■■□□□ 1.45
Scn5aQ9JJV9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Scn5aQ9JJV9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.12■■□□□ 1.45
Scn5aQ9JJV9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC24.11■■□□□ 1.45
Scn5aQ9JJV9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Scn5aQ9JJV9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Scn5aQ9JJV9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.11■■□□□ 1.45
Scn5aQ9JJV9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Scn5aQ9JJV9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Scn5aQ9JJV9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC24.1■■□□□ 1.45
Scn5aQ9JJV9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Scn5aQ9JJV9 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.09■■□□□ 1.45
Scn5aQ9JJV9 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.09■■□□□ 1.45
Scn5aQ9JJV9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Scn5aQ9JJV9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.09■■□□□ 1.45
Scn5aQ9JJV9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.08■■□□□ 1.45
Scn5aQ9JJV9 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.08■■□□□ 1.45
Scn5aQ9JJV9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.08■■□□□ 1.44
Scn5aQ9JJV9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC24.08■■□□□ 1.44
Scn5aQ9JJV9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Scn5aQ9JJV9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Scn5aQ9JJV9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Scn5aQ9JJV9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.07■■□□□ 1.44
Scn5aQ9JJV9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Scn5aQ9JJV9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Scn5aQ9JJV9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.06■■□□□ 1.44
Scn5aQ9JJV9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Scn5aQ9JJV9 Gm15546-201ENSMUST00000122095 826 ntBASIC24.06■■□□□ 1.44
Scn5aQ9JJV9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC24.06■■□□□ 1.44
Scn5aQ9JJV9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Scn5aQ9JJV9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.06■■□□□ 1.44
Scn5aQ9JJV9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Scn5aQ9JJV9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Scn5aQ9JJV9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24.05■■□□□ 1.44
Scn5aQ9JJV9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Scn5aQ9JJV9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.03■■□□□ 1.44
Scn5aQ9JJV9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Scn5aQ9JJV9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.03■■□□□ 1.44
Scn5aQ9JJV9 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.03■■□□□ 1.44
Scn5aQ9JJV9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
Scn5aQ9JJV9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Scn5aQ9JJV9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
Scn5aQ9JJV9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Scn5aQ9JJV9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Scn5aQ9JJV9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Scn5aQ9JJV9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC24.01■■□□□ 1.43
Scn5aQ9JJV9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Scn5aQ9JJV9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.01■■□□□ 1.43
Scn5aQ9JJV9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Scn5aQ9JJV9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Scn5aQ9JJV9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.99■■□□□ 1.43
Scn5aQ9JJV9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.99■■□□□ 1.43
Scn5aQ9JJV9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Scn5aQ9JJV9 Gm43566-201ENSMUST00000196851 808 ntBASIC23.98■■□□□ 1.43
Scn5aQ9JJV9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.98■■□□□ 1.43
Scn5aQ9JJV9 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.98■■□□□ 1.43
Scn5aQ9JJV9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Scn5aQ9JJV9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
Scn5aQ9JJV9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Scn5aQ9JJV9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Scn5aQ9JJV9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Scn5aQ9JJV9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Scn5aQ9JJV9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Scn5aQ9JJV9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Scn5aQ9JJV9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Scn5aQ9JJV9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Scn5aQ9JJV9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Scn5aQ9JJV9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.94■■□□□ 1.42
Scn5aQ9JJV9 Gm13238-201ENSMUST00000117655 780 ntBASIC23.94■■□□□ 1.42
Scn5aQ9JJV9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Scn5aQ9JJV9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Scn5aQ9JJV9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Scn5aQ9JJV9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Scn5aQ9JJV9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Scn5aQ9JJV9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Scn5aQ9JJV9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.9■■□□□ 1.42
Scn5aQ9JJV9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Scn5aQ9JJV9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Scn5aQ9JJV9 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.9■■□□□ 1.42
Scn5aQ9JJV9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Scn5aQ9JJV9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Scn5aQ9JJV9 Gm15820-201ENSMUST00000201566 728 ntBASIC23.89■■□□□ 1.41
Scn5aQ9JJV9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Scn5aQ9JJV9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Scn5aQ9JJV9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.88■■□□□ 1.41
Scn5aQ9JJV9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.88■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms