Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rcl1Q9JJT0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rcl1Q9JJT0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rcl1Q9JJT0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rcl1Q9JJT0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rcl1Q9JJT0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Rcl1Q9JJT0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rcl1Q9JJT0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rcl1Q9JJT0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rcl1Q9JJT0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.03■□□□□ 0.64
Rcl1Q9JJT0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rcl1Q9JJT0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rcl1Q9JJT0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Rcl1Q9JJT0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.02■□□□□ 0.64
Rcl1Q9JJT0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rcl1Q9JJT0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rcl1Q9JJT0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.01■□□□□ 0.63
Rcl1Q9JJT0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rcl1Q9JJT0 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.01■□□□□ 0.63
Rcl1Q9JJT0 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.01■□□□□ 0.63
Rcl1Q9JJT0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rcl1Q9JJT0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Rcl1Q9JJT0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rcl1Q9JJT0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rcl1Q9JJT0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rcl1Q9JJT0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19■□□□□ 0.63
Rcl1Q9JJT0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rcl1Q9JJT0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19■□□□□ 0.63
Rcl1Q9JJT0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rcl1Q9JJT0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rcl1Q9JJT0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rcl1Q9JJT0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Rcl1Q9JJT0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rcl1Q9JJT0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
Rcl1Q9JJT0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.99■□□□□ 0.63
Rcl1Q9JJT0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rcl1Q9JJT0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.99■□□□□ 0.63
Rcl1Q9JJT0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rcl1Q9JJT0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.99■□□□□ 0.63
Rcl1Q9JJT0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rcl1Q9JJT0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rcl1Q9JJT0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rcl1Q9JJT0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.97■□□□□ 0.63
Rcl1Q9JJT0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rcl1Q9JJT0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Rcl1Q9JJT0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rcl1Q9JJT0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rcl1Q9JJT0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rcl1Q9JJT0 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.96■□□□□ 0.63
Rcl1Q9JJT0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Rcl1Q9JJT0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rcl1Q9JJT0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.95■□□□□ 0.62
Rcl1Q9JJT0 Particl-201ENSMUST00000205370 1560 ntBASIC18.95■□□□□ 0.62
Rcl1Q9JJT0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rcl1Q9JJT0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rcl1Q9JJT0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rcl1Q9JJT0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rcl1Q9JJT0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rcl1Q9JJT0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rcl1Q9JJT0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rcl1Q9JJT0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rcl1Q9JJT0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Rcl1Q9JJT0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Rcl1Q9JJT0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rcl1Q9JJT0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rcl1Q9JJT0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rcl1Q9JJT0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rcl1Q9JJT0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.93■□□□□ 0.62
Rcl1Q9JJT0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rcl1Q9JJT0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rcl1Q9JJT0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rcl1Q9JJT0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rcl1Q9JJT0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rcl1Q9JJT0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rcl1Q9JJT0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rcl1Q9JJT0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.91■□□□□ 0.62
Rcl1Q9JJT0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rcl1Q9JJT0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rcl1Q9JJT0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rcl1Q9JJT0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rcl1Q9JJT0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rcl1Q9JJT0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Rcl1Q9JJT0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rcl1Q9JJT0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rcl1Q9JJT0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rcl1Q9JJT0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rcl1Q9JJT0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Rcl1Q9JJT0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rcl1Q9JJT0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rcl1Q9JJT0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Rcl1Q9JJT0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rcl1Q9JJT0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rcl1Q9JJT0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rcl1Q9JJT0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.89■□□□□ 0.61
Rcl1Q9JJT0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rcl1Q9JJT0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Rcl1Q9JJT0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.88■□□□□ 0.61
Rcl1Q9JJT0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rcl1Q9JJT0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rcl1Q9JJT0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms