Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Herpud1Q9JJK5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Herpud1Q9JJK5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Herpud1Q9JJK5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Herpud1Q9JJK5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Herpud1Q9JJK5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.79■□□□□ 0.6
Herpud1Q9JJK5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Herpud1Q9JJK5 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Herpud1Q9JJK5 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.79■□□□□ 0.6
Herpud1Q9JJK5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Herpud1Q9JJK5 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Herpud1Q9JJK5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Herpud1Q9JJK5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Herpud1Q9JJK5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Herpud1Q9JJK5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Herpud1Q9JJK5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Herpud1Q9JJK5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Herpud1Q9JJK5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Herpud1Q9JJK5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Herpud1Q9JJK5 Gm6821-201ENSMUST00000107540 542 ntBASIC18.77■□□□□ 0.6
Herpud1Q9JJK5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.77■□□□□ 0.6
Herpud1Q9JJK5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.77■□□□□ 0.6
Herpud1Q9JJK5 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Herpud1Q9JJK5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.59
Herpud1Q9JJK5 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Herpud1Q9JJK5 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Herpud1Q9JJK5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.76■□□□□ 0.59
Herpud1Q9JJK5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Herpud1Q9JJK5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Herpud1Q9JJK5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Herpud1Q9JJK5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Herpud1Q9JJK5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Herpud1Q9JJK5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Herpud1Q9JJK5 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Herpud1Q9JJK5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Herpud1Q9JJK5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Herpud1Q9JJK5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Herpud1Q9JJK5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Herpud1Q9JJK5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.73■□□□□ 0.59
Herpud1Q9JJK5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Herpud1Q9JJK5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.72■□□□□ 0.59
Herpud1Q9JJK5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Herpud1Q9JJK5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Herpud1Q9JJK5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Herpud1Q9JJK5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Herpud1Q9JJK5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Herpud1Q9JJK5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.71■□□□□ 0.59
Herpud1Q9JJK5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Herpud1Q9JJK5 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Herpud1Q9JJK5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Herpud1Q9JJK5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
Herpud1Q9JJK5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Herpud1Q9JJK5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Herpud1Q9JJK5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Herpud1Q9JJK5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.7■□□□□ 0.58
Herpud1Q9JJK5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Herpud1Q9JJK5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Herpud1Q9JJK5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Herpud1Q9JJK5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Herpud1Q9JJK5 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Herpud1Q9JJK5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Herpud1Q9JJK5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Herpud1Q9JJK5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Herpud1Q9JJK5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.68■□□□□ 0.58
Herpud1Q9JJK5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Herpud1Q9JJK5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.67■□□□□ 0.58
Herpud1Q9JJK5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Herpud1Q9JJK5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Herpud1Q9JJK5 Gm8503-201ENSMUST00000118131 455 ntBASIC18.67■□□□□ 0.58
Herpud1Q9JJK5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Herpud1Q9JJK5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Herpud1Q9JJK5 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Herpud1Q9JJK5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.66■□□□□ 0.58
Herpud1Q9JJK5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Herpud1Q9JJK5 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Herpud1Q9JJK5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.66■□□□□ 0.58
Herpud1Q9JJK5 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Herpud1Q9JJK5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Herpud1Q9JJK5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Herpud1Q9JJK5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Herpud1Q9JJK5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Herpud1Q9JJK5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Herpud1Q9JJK5 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Herpud1Q9JJK5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Herpud1Q9JJK5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Herpud1Q9JJK5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Herpud1Q9JJK5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Herpud1Q9JJK5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Herpud1Q9JJK5 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Herpud1Q9JJK5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Herpud1Q9JJK5 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.64■□□□□ 0.57
Herpud1Q9JJK5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Herpud1Q9JJK5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Herpud1Q9JJK5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Herpud1Q9JJK5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Herpud1Q9JJK5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Herpud1Q9JJK5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Herpud1Q9JJK5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Herpud1Q9JJK5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Herpud1Q9JJK5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms