Protein–RNA interactions for Protein: Q9D8B4

Ndufa11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa11Q9D8B4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ndufa11Q9D8B4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ndufa11Q9D8B4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Ndufa11Q9D8B4 Gm15820-201ENSMUST00000201566 728 ntBASIC20.11■□□□□ 0.81
Ndufa11Q9D8B4 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.11■□□□□ 0.81
Ndufa11Q9D8B4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ndufa11Q9D8B4 Gm43566-201ENSMUST00000196851 808 ntBASIC20.1■□□□□ 0.81
Ndufa11Q9D8B4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ndufa11Q9D8B4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ndufa11Q9D8B4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ndufa11Q9D8B4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ndufa11Q9D8B4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ndufa11Q9D8B4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.08■□□□□ 0.81
Ndufa11Q9D8B4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ndufa11Q9D8B4 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.08■□□□□ 0.81
Ndufa11Q9D8B4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ndufa11Q9D8B4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Ndufa11Q9D8B4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.07■□□□□ 0.8
Ndufa11Q9D8B4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ndufa11Q9D8B4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Ndufa11Q9D8B4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ndufa11Q9D8B4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ndufa11Q9D8B4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ndufa11Q9D8B4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Ndufa11Q9D8B4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ndufa11Q9D8B4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.06■□□□□ 0.8
Ndufa11Q9D8B4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ndufa11Q9D8B4 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.06■□□□□ 0.8
Ndufa11Q9D8B4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ndufa11Q9D8B4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ndufa11Q9D8B4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ndufa11Q9D8B4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ndufa11Q9D8B4 Gm45444-201ENSMUST00000211394 898 ntBASIC20.04■□□□□ 0.8
Ndufa11Q9D8B4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ndufa11Q9D8B4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ndufa11Q9D8B4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ndufa11Q9D8B4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ndufa11Q9D8B4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ndufa11Q9D8B4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Ndufa11Q9D8B4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Ndufa11Q9D8B4 Gm13238-201ENSMUST00000117655 780 ntBASIC20.01■□□□□ 0.79
Ndufa11Q9D8B4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ndufa11Q9D8B4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ndufa11Q9D8B4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ndufa11Q9D8B4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Ndufa11Q9D8B4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ndufa11Q9D8B4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Ndufa11Q9D8B4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20■□□□□ 0.79
Ndufa11Q9D8B4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ndufa11Q9D8B4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
Ndufa11Q9D8B4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.99■□□□□ 0.79
Ndufa11Q9D8B4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.99■□□□□ 0.79
Ndufa11Q9D8B4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ndufa11Q9D8B4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ndufa11Q9D8B4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.98■□□□□ 0.79
Ndufa11Q9D8B4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.98■□□□□ 0.79
Ndufa11Q9D8B4 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ndufa11Q9D8B4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.98■□□□□ 0.79
Ndufa11Q9D8B4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ndufa11Q9D8B4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Ndufa11Q9D8B4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ndufa11Q9D8B4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.97■□□□□ 0.79
Ndufa11Q9D8B4 Gm45102-201ENSMUST00000207427 857 ntBASIC19.97■□□□□ 0.79
Ndufa11Q9D8B4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.96■□□□□ 0.79
Ndufa11Q9D8B4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.96■□□□□ 0.79
Ndufa11Q9D8B4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Ndufa11Q9D8B4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ndufa11Q9D8B4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ndufa11Q9D8B4 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.95■□□□□ 0.78
Ndufa11Q9D8B4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Ndufa11Q9D8B4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ndufa11Q9D8B4 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.95■□□□□ 0.78
Ndufa11Q9D8B4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ndufa11Q9D8B4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ndufa11Q9D8B4 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.94■□□□□ 0.78
Ndufa11Q9D8B4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ndufa11Q9D8B4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ndufa11Q9D8B4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ndufa11Q9D8B4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ndufa11Q9D8B4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Ndufa11Q9D8B4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ndufa11Q9D8B4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ndufa11Q9D8B4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ndufa11Q9D8B4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ndufa11Q9D8B4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.92■□□□□ 0.78
Ndufa11Q9D8B4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ndufa11Q9D8B4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ndufa11Q9D8B4 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.92■□□□□ 0.78
Ndufa11Q9D8B4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ndufa11Q9D8B4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ndufa11Q9D8B4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ndufa11Q9D8B4 Gm14117-201ENSMUST00000122417 843 ntBASIC19.91■□□□□ 0.78
Ndufa11Q9D8B4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ndufa11Q9D8B4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Ndufa11Q9D8B4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ndufa11Q9D8B4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ndufa11Q9D8B4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Ndufa11Q9D8B4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.9■□□□□ 0.78
Ndufa11Q9D8B4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ndufa11Q9D8B4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms