Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.3■□□□□ 0.84
Rtl8cQ9D6I0 Gm4799-201ENSMUST00000095396 657 ntBASIC20.3■□□□□ 0.84
Rtl8cQ9D6I0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtl8cQ9D6I0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtl8cQ9D6I0 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.3■□□□□ 0.84
Rtl8cQ9D6I0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtl8cQ9D6I0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtl8cQ9D6I0 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.29■□□□□ 0.84
Rtl8cQ9D6I0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rtl8cQ9D6I0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.29■□□□□ 0.84
Rtl8cQ9D6I0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rtl8cQ9D6I0 Gm11599-201ENSMUST00000118720 878 ntBASIC20.28■□□□□ 0.84
Rtl8cQ9D6I0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rtl8cQ9D6I0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rtl8cQ9D6I0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rtl8cQ9D6I0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rtl8cQ9D6I0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtl8cQ9D6I0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtl8cQ9D6I0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rtl8cQ9D6I0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtl8cQ9D6I0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rtl8cQ9D6I0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Rtl8cQ9D6I0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl8cQ9D6I0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl8cQ9D6I0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rtl8cQ9D6I0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtl8cQ9D6I0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rtl8cQ9D6I0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtl8cQ9D6I0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Rtl8cQ9D6I0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtl8cQ9D6I0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtl8cQ9D6I0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtl8cQ9D6I0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtl8cQ9D6I0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Rtl8cQ9D6I0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rtl8cQ9D6I0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtl8cQ9D6I0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtl8cQ9D6I0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtl8cQ9D6I0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Rtl8cQ9D6I0 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.2■□□□□ 0.82
Rtl8cQ9D6I0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtl8cQ9D6I0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rtl8cQ9D6I0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtl8cQ9D6I0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rtl8cQ9D6I0 Gm9812-201ENSMUST00000061934 968 ntBASIC20.19■□□□□ 0.82
Rtl8cQ9D6I0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rtl8cQ9D6I0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtl8cQ9D6I0 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.18■□□□□ 0.82
Rtl8cQ9D6I0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Rtl8cQ9D6I0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtl8cQ9D6I0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Rtl8cQ9D6I0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Rtl8cQ9D6I0 Mir3960-201ENSMUST00000198213 73 ntBASIC20.17■□□□□ 0.82
Rtl8cQ9D6I0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtl8cQ9D6I0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.16■□□□□ 0.82
Rtl8cQ9D6I0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.16■□□□□ 0.82
Rtl8cQ9D6I0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtl8cQ9D6I0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtl8cQ9D6I0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtl8cQ9D6I0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rtl8cQ9D6I0 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.15■□□□□ 0.82
Rtl8cQ9D6I0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtl8cQ9D6I0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtl8cQ9D6I0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtl8cQ9D6I0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Rtl8cQ9D6I0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Rtl8cQ9D6I0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtl8cQ9D6I0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtl8cQ9D6I0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtl8cQ9D6I0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtl8cQ9D6I0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rtl8cQ9D6I0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtl8cQ9D6I0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rtl8cQ9D6I0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtl8cQ9D6I0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtl8cQ9D6I0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtl8cQ9D6I0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rtl8cQ9D6I0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rtl8cQ9D6I0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtl8cQ9D6I0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rtl8cQ9D6I0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rtl8cQ9D6I0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rtl8cQ9D6I0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.11■□□□□ 0.81
Rtl8cQ9D6I0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rtl8cQ9D6I0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtl8cQ9D6I0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtl8cQ9D6I0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.1■□□□□ 0.81
Rtl8cQ9D6I0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtl8cQ9D6I0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.09■□□□□ 0.81
Rtl8cQ9D6I0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtl8cQ9D6I0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtl8cQ9D6I0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtl8cQ9D6I0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtl8cQ9D6I0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtl8cQ9D6I0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rtl8cQ9D6I0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rtl8cQ9D6I0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rtl8cQ9D6I0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rtl8cQ9D6I0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtl8cQ9D6I0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 166.1 ms