Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.87■□□□□ 0.93
Trim13Q9CYB0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim13Q9CYB0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim13Q9CYB0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Trim13Q9CYB0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim13Q9CYB0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Trim13Q9CYB0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim13Q9CYB0 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.85■□□□□ 0.93
Trim13Q9CYB0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim13Q9CYB0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim13Q9CYB0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim13Q9CYB0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Trim13Q9CYB0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim13Q9CYB0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Trim13Q9CYB0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Trim13Q9CYB0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim13Q9CYB0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trim13Q9CYB0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim13Q9CYB0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim13Q9CYB0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim13Q9CYB0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trim13Q9CYB0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim13Q9CYB0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Trim13Q9CYB0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim13Q9CYB0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim13Q9CYB0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim13Q9CYB0 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.81■□□□□ 0.92
Trim13Q9CYB0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim13Q9CYB0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.81■□□□□ 0.92
Trim13Q9CYB0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim13Q9CYB0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Trim13Q9CYB0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
Trim13Q9CYB0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim13Q9CYB0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim13Q9CYB0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim13Q9CYB0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Trim13Q9CYB0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim13Q9CYB0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim13Q9CYB0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim13Q9CYB0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim13Q9CYB0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim13Q9CYB0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Trim13Q9CYB0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim13Q9CYB0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim13Q9CYB0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim13Q9CYB0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim13Q9CYB0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Trim13Q9CYB0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Trim13Q9CYB0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim13Q9CYB0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim13Q9CYB0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim13Q9CYB0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Trim13Q9CYB0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Trim13Q9CYB0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim13Q9CYB0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim13Q9CYB0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim13Q9CYB0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim13Q9CYB0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Trim13Q9CYB0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Trim13Q9CYB0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim13Q9CYB0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim13Q9CYB0 Gm45855-201ENSMUST00000212546 880 ntBASIC20.75■□□□□ 0.91
Trim13Q9CYB0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.75■□□□□ 0.91
Trim13Q9CYB0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.75■□□□□ 0.91
Trim13Q9CYB0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Trim13Q9CYB0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim13Q9CYB0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim13Q9CYB0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim13Q9CYB0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim13Q9CYB0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.74■□□□□ 0.91
Trim13Q9CYB0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Trim13Q9CYB0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim13Q9CYB0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Trim13Q9CYB0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim13Q9CYB0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim13Q9CYB0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim13Q9CYB0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.73■□□□□ 0.91
Trim13Q9CYB0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim13Q9CYB0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim13Q9CYB0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim13Q9CYB0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Trim13Q9CYB0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim13Q9CYB0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trim13Q9CYB0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim13Q9CYB0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trim13Q9CYB0 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.71■□□□□ 0.91
Trim13Q9CYB0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
Trim13Q9CYB0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim13Q9CYB0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim13Q9CYB0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim13Q9CYB0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim13Q9CYB0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim13Q9CYB0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.69■□□□□ 0.9
Trim13Q9CYB0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim13Q9CYB0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim13Q9CYB0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trim13Q9CYB0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim13Q9CYB0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim13Q9CYB0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Trim13Q9CYB0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms