Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC25,79■■□□□ 1,72
Chd1lQ9CXF7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25,79■■□□□ 1,72
Chd1lQ9CXF7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC25,79■■□□□ 1,72
Chd1lQ9CXF7 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC25,79■■□□□ 1,72
Chd1lQ9CXF7 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC25,79■■□□□ 1,72
Chd1lQ9CXF7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC25,78■■□□□ 1,72
Chd1lQ9CXF7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC25,78■■□□□ 1,72
Chd1lQ9CXF7 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC25,78■■□□□ 1,72
Chd1lQ9CXF7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC25,78■■□□□ 1,72
Chd1lQ9CXF7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25,78■■□□□ 1,72
Chd1lQ9CXF7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC25,78■■□□□ 1,72
Chd1lQ9CXF7 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC25,78■■□□□ 1,72
Chd1lQ9CXF7 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC25,78■■□□□ 1,72
Chd1lQ9CXF7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25,78■■□□□ 1,72
Chd1lQ9CXF7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25,77■■□□□ 1,72
Chd1lQ9CXF7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25,77■■□□□ 1,72
Chd1lQ9CXF7 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC25,76■■□□□ 1,71
Chd1lQ9CXF7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC25,76■■□□□ 1,71
Chd1lQ9CXF7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25,76■■□□□ 1,71
Chd1lQ9CXF7 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC25,76■■□□□ 1,71
Chd1lQ9CXF7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25,75■■□□□ 1,71
Chd1lQ9CXF7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC25,75■■□□□ 1,71
Chd1lQ9CXF7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC25,74■■□□□ 1,71
Chd1lQ9CXF7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25,74■■□□□ 1,71
Chd1lQ9CXF7 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC25,74■■□□□ 1,71
Chd1lQ9CXF7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC25,74■■□□□ 1,71
Chd1lQ9CXF7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC25,74■■□□□ 1,71
Chd1lQ9CXF7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC25,73■■□□□ 1,71
Chd1lQ9CXF7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC25,72■■□□□ 1,71
Chd1lQ9CXF7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC25,72■■□□□ 1,71
Chd1lQ9CXF7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC25,72■■□□□ 1,71
Chd1lQ9CXF7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25,71■■□□□ 1,71
Chd1lQ9CXF7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC25,71■■□□□ 1,71
Chd1lQ9CXF7 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC25,71■■□□□ 1,71
Chd1lQ9CXF7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC25,71■■□□□ 1,71
Chd1lQ9CXF7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC25,71■■□□□ 1,71
Chd1lQ9CXF7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC25,7■■□□□ 1,71
Chd1lQ9CXF7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25,7■■□□□ 1,7
Chd1lQ9CXF7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC25,69■■□□□ 1,7
Chd1lQ9CXF7 Dmtn-209ENSMUST00000228295 2572 ntBASIC25,69■■□□□ 1,7
Chd1lQ9CXF7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC25,69■■□□□ 1,7
Chd1lQ9CXF7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC25,69■■□□□ 1,7
Chd1lQ9CXF7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC25,69■■□□□ 1,7
Chd1lQ9CXF7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC25,68■■□□□ 1,7
Chd1lQ9CXF7 Gm14121-201ENSMUST00000121441 1380 ntBASIC25,68■■□□□ 1,7
Chd1lQ9CXF7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25,68■■□□□ 1,7
Chd1lQ9CXF7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC25,67■■□□□ 1,7
Chd1lQ9CXF7 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC25,67■■□□□ 1,7
Chd1lQ9CXF7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC25,67■■□□□ 1,7
Chd1lQ9CXF7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC25,67■■□□□ 1,7
Chd1lQ9CXF7 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25,66■■□□□ 1,7
Chd1lQ9CXF7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC25,66■■□□□ 1,7
Chd1lQ9CXF7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC25,65■■□□□ 1,7
Chd1lQ9CXF7 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC25,65■■□□□ 1,7
Chd1lQ9CXF7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC25,65■■□□□ 1,7
Chd1lQ9CXF7 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC25,64■■□□□ 1,7
Chd1lQ9CXF7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25,64■■□□□ 1,7
Chd1lQ9CXF7 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC25,64■■□□□ 1,7
Chd1lQ9CXF7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC25,64■■□□□ 1,7
Chd1lQ9CXF7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25,64■■□□□ 1,69
Chd1lQ9CXF7 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC25,64■■□□□ 1,69
Chd1lQ9CXF7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC25,64■■□□□ 1,69
Chd1lQ9CXF7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC25,64■■□□□ 1,69
Chd1lQ9CXF7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25,63■■□□□ 1,69
Chd1lQ9CXF7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC25,63■■□□□ 1,69
Chd1lQ9CXF7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25,63■■□□□ 1,69
Chd1lQ9CXF7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25,62■■□□□ 1,69
Chd1lQ9CXF7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25,62■■□□□ 1,69
Chd1lQ9CXF7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25,62■■□□□ 1,69
Chd1lQ9CXF7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25,62■■□□□ 1,69
Chd1lQ9CXF7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC25,61■■□□□ 1,69
Chd1lQ9CXF7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC25,61■■□□□ 1,69
Chd1lQ9CXF7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25,61■■□□□ 1,69
Chd1lQ9CXF7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC25,6■■□□□ 1,69
Chd1lQ9CXF7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC25,6■■□□□ 1,69
Chd1lQ9CXF7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25,6■■□□□ 1,69
Chd1lQ9CXF7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC25,6■■□□□ 1,69
Chd1lQ9CXF7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC25,6■■□□□ 1,69
Chd1lQ9CXF7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25,6■■□□□ 1,69
Chd1lQ9CXF7 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25,59■■□□□ 1,69
Chd1lQ9CXF7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25,59■■□□□ 1,69
Chd1lQ9CXF7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25,59■■□□□ 1,69
Chd1lQ9CXF7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25,59■■□□□ 1,69
Chd1lQ9CXF7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC25,58■■□□□ 1,69
Chd1lQ9CXF7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC25,58■■□□□ 1,69
Chd1lQ9CXF7 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC25,58■■□□□ 1,68
Chd1lQ9CXF7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC25,57■■□□□ 1,68
Chd1lQ9CXF7 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC25,57■■□□□ 1,68
Chd1lQ9CXF7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC25,57■■□□□ 1,68
Chd1lQ9CXF7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC25,57■■□□□ 1,68
Chd1lQ9CXF7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC25,57■■□□□ 1,68
Chd1lQ9CXF7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC25,56■■□□□ 1,68
Chd1lQ9CXF7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC25,56■■□□□ 1,68
Chd1lQ9CXF7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC25,56■■□□□ 1,68
Chd1lQ9CXF7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC25,55■■□□□ 1,68
Chd1lQ9CXF7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC25,55■■□□□ 1,68
Chd1lQ9CXF7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC25,54■■□□□ 1,68
Chd1lQ9CXF7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25,54■■□□□ 1,68
Chd1lQ9CXF7 Gm13042-201ENSMUST00000119244 1955 ntBASIC25,54■■□□□ 1,68
Chd1lQ9CXF7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25,53■■□□□ 1,68
Retrieved 100 of 76,532 protein–RNA pairs in 25,6 ms