Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Trim34aQ99PP6 Gm44428-201ENSMUST00000204474 874 ntBASIC28.53■■■□□ 2.16
Trim34aQ99PP6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC28.53■■■□□ 2.16
Trim34aQ99PP6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Trim34aQ99PP6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Trim34aQ99PP6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
Trim34aQ99PP6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Trim34aQ99PP6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC28.51■■■□□ 2.15
Trim34aQ99PP6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC28.51■■■□□ 2.15
Trim34aQ99PP6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
Trim34aQ99PP6 Gm5921-201ENSMUST00000075898 882 ntBASIC28.51■■■□□ 2.15
Trim34aQ99PP6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Trim34aQ99PP6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Trim34aQ99PP6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
Trim34aQ99PP6 Gm4419-202ENSMUST00000226239 1431 ntBASIC28.49■■■□□ 2.15
Trim34aQ99PP6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC28.48■■■□□ 2.15
Trim34aQ99PP6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Trim34aQ99PP6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Trim34aQ99PP6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Trim34aQ99PP6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC28.46■■■□□ 2.15
Trim34aQ99PP6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Trim34aQ99PP6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Trim34aQ99PP6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Trim34aQ99PP6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC28.44■■■□□ 2.14
Trim34aQ99PP6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Trim34aQ99PP6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC28.44■■■□□ 2.14
Trim34aQ99PP6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Trim34aQ99PP6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC28.43■■■□□ 2.14
Trim34aQ99PP6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Trim34aQ99PP6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Trim34aQ99PP6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Trim34aQ99PP6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC28.4■■■□□ 2.14
Trim34aQ99PP6 Gm5812-201ENSMUST00000061073 957 ntBASIC28.4■■■□□ 2.14
Trim34aQ99PP6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC28.39■■■□□ 2.13
Trim34aQ99PP6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Trim34aQ99PP6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Trim34aQ99PP6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Trim34aQ99PP6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Trim34aQ99PP6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Trim34aQ99PP6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
Trim34aQ99PP6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Trim34aQ99PP6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC28.36■■■□□ 2.13
Trim34aQ99PP6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Trim34aQ99PP6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Trim34aQ99PP6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
Trim34aQ99PP6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Trim34aQ99PP6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.34■■■□□ 2.13
Trim34aQ99PP6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
Trim34aQ99PP6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Trim34aQ99PP6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Trim34aQ99PP6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC28.32■■■□□ 2.12
Trim34aQ99PP6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC28.32■■■□□ 2.12
Trim34aQ99PP6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Trim34aQ99PP6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Trim34aQ99PP6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
Trim34aQ99PP6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Trim34aQ99PP6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC28.29■■■□□ 2.12
Trim34aQ99PP6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Trim34aQ99PP6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Trim34aQ99PP6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC28.28■■■□□ 2.12
Trim34aQ99PP6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Trim34aQ99PP6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Trim34aQ99PP6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Trim34aQ99PP6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC28.26■■■□□ 2.11
Trim34aQ99PP6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Trim34aQ99PP6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
Trim34aQ99PP6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Trim34aQ99PP6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Trim34aQ99PP6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Trim34aQ99PP6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
Trim34aQ99PP6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Trim34aQ99PP6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Trim34aQ99PP6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Trim34aQ99PP6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
Trim34aQ99PP6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC28.22■■■□□ 2.11
Trim34aQ99PP6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Trim34aQ99PP6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Trim34aQ99PP6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
Trim34aQ99PP6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Trim34aQ99PP6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC28.21■■■□□ 2.11
Trim34aQ99PP6 Gm15546-201ENSMUST00000122095 826 ntBASIC28.2■■■□□ 2.1
Trim34aQ99PP6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC28.2■■■□□ 2.1
Trim34aQ99PP6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC28.2■■■□□ 2.1
Trim34aQ99PP6 AC117769.4-201ENSMUST00000225679 685 ntBASIC28.2■■■□□ 2.1
Trim34aQ99PP6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Trim34aQ99PP6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Trim34aQ99PP6 Gm43592-201ENSMUST00000196922 1165 ntBASIC28.19■■■□□ 2.1
Trim34aQ99PP6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Trim34aQ99PP6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
Trim34aQ99PP6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
Trim34aQ99PP6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Trim34aQ99PP6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Trim34aQ99PP6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Trim34aQ99PP6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
Trim34aQ99PP6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Trim34aQ99PP6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Trim34aQ99PP6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
Trim34aQ99PP6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
Trim34aQ99PP6 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.15■■■□□ 2.1
Trim34aQ99PP6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms