Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn4rQ99PI8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn4rQ99PI8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Rtn4rQ99PI8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rtn4rQ99PI8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4rQ99PI8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rtn4rQ99PI8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rtn4rQ99PI8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn4rQ99PI8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Rtn4rQ99PI8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4rQ99PI8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.99■□□□□ 0.79
Rtn4rQ99PI8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4rQ99PI8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4rQ99PI8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4rQ99PI8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn4rQ99PI8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Rtn4rQ99PI8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4rQ99PI8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4rQ99PI8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4rQ99PI8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4rQ99PI8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn4rQ99PI8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4rQ99PI8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4rQ99PI8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4rQ99PI8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtn4rQ99PI8 Gm16437-201ENSMUST00000025669 507 ntBASIC19.96■□□□□ 0.79
Rtn4rQ99PI8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtn4rQ99PI8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rtn4rQ99PI8 Gm9806-201ENSMUST00000051080 552 ntBASIC19.95■□□□□ 0.78
Rtn4rQ99PI8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4rQ99PI8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4rQ99PI8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4rQ99PI8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4rQ99PI8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4rQ99PI8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
Rtn4rQ99PI8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4rQ99PI8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4rQ99PI8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.94■□□□□ 0.78
Rtn4rQ99PI8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtn4rQ99PI8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rtn4rQ99PI8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4rQ99PI8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4rQ99PI8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rtn4rQ99PI8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4rQ99PI8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4rQ99PI8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4rQ99PI8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4rQ99PI8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Rtn4rQ99PI8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.92■□□□□ 0.78
Rtn4rQ99PI8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtn4rQ99PI8 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.91■□□□□ 0.78
Rtn4rQ99PI8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Rtn4rQ99PI8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4rQ99PI8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4rQ99PI8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Rtn4rQ99PI8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtn4rQ99PI8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4rQ99PI8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4rQ99PI8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rtn4rQ99PI8 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.9■□□□□ 0.78
Rtn4rQ99PI8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4rQ99PI8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4rQ99PI8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rtn4rQ99PI8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rtn4rQ99PI8 Mir6538-201ENSMUST00000183713 110 ntBASIC19.89■□□□□ 0.77
Rtn4rQ99PI8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.89■□□□□ 0.77
Rtn4rQ99PI8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Rtn4rQ99PI8 Terc-201ENSMUST00000082862 423 ntBASIC19.89■□□□□ 0.77
Rtn4rQ99PI8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Rtn4rQ99PI8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.88■□□□□ 0.77
Rtn4rQ99PI8 Gm11687-201ENSMUST00000118911 886 ntBASIC19.88■□□□□ 0.77
Rtn4rQ99PI8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4rQ99PI8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4rQ99PI8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4rQ99PI8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rtn4rQ99PI8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4rQ99PI8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4rQ99PI8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4rQ99PI8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.86■□□□□ 0.77
Rtn4rQ99PI8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4rQ99PI8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4rQ99PI8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4rQ99PI8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4rQ99PI8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.86■□□□□ 0.77
Rtn4rQ99PI8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4rQ99PI8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4rQ99PI8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4rQ99PI8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4rQ99PI8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn4rQ99PI8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn4rQ99PI8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn4rQ99PI8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn4rQ99PI8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.84■□□□□ 0.77
Rtn4rQ99PI8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn4rQ99PI8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.84■□□□□ 0.77
Rtn4rQ99PI8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn4rQ99PI8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rtn4rQ99PI8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn4rQ99PI8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rtn4rQ99PI8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 201.5 ms